Brassica napus (rape): 106369254
Help
Entry
106369254 CDS
T04128
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106369254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106369254
04121 Ubiquitin system [BR:
bna04121
]
106369254
03036 Chromosome and associated proteins [BR:
bna03036
]
106369254
03400 DNA repair and recombination proteins [BR:
bna03400
]
106369254
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106369254
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106369254
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106369254
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106369254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-RING_UBOX
zf-RING_6
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-HC5HC2H_2
zf-RING_10
PHD_NSD
PTCB-BRCT
RTT107_BRCT_5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
106369254
NCBI-ProteinID:
XP_013664833
LinkDB
All DBs
Position
A9:complement(44338021..44341507)
Genome browser
AA seq
693 aa
AA seq
DB search
MANFTNMLMNPWVLHLQKLDLELKCPLCLKLLNQPVLLPCDHIFCDSCIHESSQVESGCP
VCKSKHSKKARRNLPFMESVISIYKSLNAAVIVHLPQLQIRNTSNGGSEDSEMIDKDVIK
GNGGGSDSSSLDGSPLPASESDNSGNHTPESQKGPAAKCMSGITASEQFCNAARKRICVE
SFSRDDSMLPKSKDSTPNPITQDQTVNLLMENVQSCDNGKAQIHQLPESHTEQAAKRKCD
ITVSEAMENHQKVYKRQKNLMQKADDIELKNNYTSTSDDQLIGNTSKSSDLTPSVISDKP
SSNITICGFCQSARVSEASGEMLHYSRGNPVFGDDIFRSNVIHVHSACIEWAPQVYYEAD
TVKNLKAELARGMKIKCTKCSLKGAALGCYVKSCRRSYHVPCAREMSRCRWDNEDFLLLC
PAHSSVKFPSEKSRPRCCLPKADSLPEGKSAELCPLEDKPAMTKDLVLCGSALSQDDKRV
MEKLAAKLNATISRYWNPSVTHVIASTNEKGACTRTLKVLMGILNGKWIINADWMKASLE
ASQPVDEEQYEIHIDTQGCQDGPKTARLRAASNKPKLFDGLKFYFHGDFFKGYKEDLQNL
VKVAGGTILKTEDELTAESSNNVSDSDQRSSSAIVVYNIDPPPGCGLGEEVTIIWQRANE
AEALSSKTGSKVVGHTWLLESIAGYKLHPMIIS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttcaccaatatgctgatgaatccatgggttcttcacctccagaagctcgat
ttagagctcaagtgccctctatgcttgaaattgcttaatcaaccggtgttgcttccttgt
gatcacatcttctgcgattcatgtatacacgaatcgtcacaagttgaatcaggctgtcct
gtttgcaaatccaaacactccaagaaggctcggaggaatctgcctttcatggagagtgtt
ataagcatatacaaaagcttgaacgcagctgtcattgttcatctaccacagttacagatc
cgaaacacttccaacggtggatctgaagattctgagatgattgacaaggatgtgatcaag
ggcaatggtggtggtagtgactcttctagtcttgatggttctccccttccagcctctgaa
tcagacaactctggcaatcacacaccggaaagtcagaaaggaccagctgctaaatgtatg
agtggcatcactgcttctgagcagttttgcaatgctgcgaggaagagaatttgtgtggag
tcctttagtcgtgatgattctatgcttccaaagtcaaaagacagtactccaaatccgata
actcaggatcaaactgtgaatctgttgatggagaacgtccagtcatgtgataatggaaaa
gcacagatacatcagttacctgaaagtcatactgaacaagctgcaaaaaggaagtgtgac
atcaccgtttctgaagcaatggaaaatcatcaaaaggtttacaagaggcagaagaacctg
atgcaaaaagctgatgatattgaattgaagaacaactacacatcaacctctgatgatcag
ctaattgggaatacctcaaagtcatcagatttgacaccatctgtaatttcagataaacca
tcatccaacataaccatatgtggcttctgccagtctgctagggtatctgaggccagtgga
gaaatgctgcattactccagagggaatccggtgtttggagatgacatcttccgatccaat
gttatccatgtccatagcgcatgtattgaatgggcaccgcaagtttactatgaagctgac
acagtgaagaacctgaaagcagagctggctaggggaatgaaaatcaagtgcaccaaatgt
agtctgaaaggggctgccttaggctgctatgtcaagtcttgccgcaggagctaccatgtt
ccatgtgcacgagagatgtccagatgccggtgggataatgaagactttctcctgctttgt
ccggctcattcttcagttaaattcccaagcgagaagtctagacctcgttgttgtctacct
aaagctgactccttacctgaaggaaaatctgctgaactttgtccgctggaagacaaacct
gcaatgacaaaagaccttgttctgtgtggatcagcactctctcaagatgataagcgtgtg
atggaaaagttagctgctaaactcaatgcgacaatatcaagatactggaacccaagtgtg
acacatgtgattgcttctacaaacgagaaaggagcttgcacaagaaccttgaaggtgctt
atgggtattctcaacggaaagtggattatcaatgcagactggatgaaagcaagccttgaa
gcttctcaacctgttgatgaagaacaatatgagattcacatcgacactcaaggatgtcaa
gatggaccaaaaaccgcaagactcagagcagcatctaataaaccaaagctctttgacggc
ttgaaattctatttccatggagacttcttcaaagggtacaaagaagaccttcagaaccta
gtaaaagtcgctggcggtacgatcttgaagacagaggacgagctcaccgcagaaagcagc
aacaacgtcagtgacagtgaccaaagatcatcatcagcgattgtggtgtacaacattgat
cctccaccaggatgtggtttaggcgaagaagtgacgatcatttggcaaagagcgaatgaa
gcagaagctttatcaagcaaaacagggtcaaaggtcgttggtcacacttggctattggag
tccattgctggttataagttacatcctatgatcatcagctaa
DBGET
integrated database retrieval system
