Brassica napus (rape): 106369280
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Entry
106369280 CDS
T04128
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X2
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
bna
Brassica napus (rape)
Pathway
bna00280
Valine, leucine and isoleucine degradation
bna01100
Metabolic pathways
Module
bna_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106369280
Enzymes [BR:
bna01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
106369280
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
HlyD_D23
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
NQRA_N
ATPgrasp_TupA
POTRA_TamA_1
Motif
Other DBs
NCBI-GeneID:
106369280
NCBI-ProteinID:
XP_013664865
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All DBs
Position
C8:49197611..49201697
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AA seq
740 aa
AA seq
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MSMTIWALRRDVRRKSYSILVRYISGSSSSGRSSVKPNEQCIEKVLVANRGEIACRIMRT
AKRLGIQTVAVYSDADRDSLHVKSADEAVRIGPPPARLSYLSAAAIMEAAARTGAQAIHP
GYGFLSESSDFAQLCEDSGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGHEQD
IDHMKSEAGKIGYPIIIKPTHGGGGKGMRIVQSEKDFADSFLGAQREAAASFGVNTILLE
KYITRPRHIEVQVFGDKHGNVLHLYERDCSVQRRHQKIIEEAPAPNISEKFRASLGQAAV
SAARAVGYYNAGTVEFIVDTESDQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGE
PLPISQAEVPLLGHAFEARIYAENVPKGFLPATGVLNHYRPVAVSSSAVRVETGVEQGDT
VSMHYDPMIAKLVVSGGNRGEALVKLKDCLSNFQVAGVPTNINFLQKLASHKEFAVGNVE
THFIEHHRTDLFADESNPAAAEMAYKAAKHSAALVAACVSAIEHSSWNESNHGKLPSIWH
SHPPFRVHHEAKQTIELEWDNECEGTGSNLVSLGVINQPDGSYLIQEGSDSPSLEVRVTR
AGGNCDFRVEAAGLSMNVTIAAYLKDGYKHIHIWRGSEHHQFKQKVGIEFSGDEEGVQHR
TSSETSSHPPGTVVAPMAGLVVKVLVENEAKVDQGQPVLVMEAMKMEHVVKAPSSGSIQD
LKVKAGQQVSDGSALFRIKG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacgatatgggcacttcgccgtgacgttcgccggaaaagttactcgatcctc
gtcagatacatctccggctcttcatcttctggaagatcttcggtcaagcctaatgagcag
tgtatcgagaaggttctagtggcgaacagaggcgagatcgcttgccggatcatgagaact
gcgaagcgtctagggattcagaccgtcgctgtttacagcgacgctgacagagactctctc
cacgtgaaatctgccgacgaggccgtacgaatcggccctcctccggctcggctcagttac
ctcagcgccgccgctatcatggaggcagcggctcgaaccggcgcacaggcaatacaccct
ggctacgggttcttgtcggaaagttcggactttgctcagctctgtgaagattcgggacta
acattcattggacctccagcatctgcaattagagacatgggtgataaaagtgcgtccaag
agaataatgggggctgctggagttcctctcgtgcctgggtatcatggccatgagcaagat
attgatcatatgaagtcagaagcgggaaagattggataccctattataatcaaaccaaca
catggaggtgggggaaagggaatgaggatagtgcaaagtgagaaggattttgctgactcg
tttttgggggctcaacgtgaggctgctgcttcttttggcgttaacacaattcttctcgag
aaatacatcactcgaccgaggcatatagaagtccaggtatttggtgacaaacatgggaat
gttcttcatctttacgaaagggattgcagtgtacaaagaagacaccaaaagattattgaa
gaagctcctgcgcctaatatatctgaaaagttccgggctagcttaggccaagctgctgtc
tctgctgcacgggcagttggatattacaatgctgggacggtggagttcatagttgacact
gagtctgatcaattttattttatggagatgaacacccgtctccaggttgagcatcctgta
actgagatgattgttggtcaagatcttgtggaatggcagattcgtgttgccaatggggaa
cctctccccattagccaagccgaggtgccattgttaggtcatgcctttgaggcgaggata
tatgctgaaaatgttccaaagggatttcttcctgcaactggagtcctcaatcattatcgc
cctgttgcagtctcatcatcagcagttcgggtggaaactggagttgagcaaggagacact
gttagcatgcactatgatcctatgattgcaaagcttgttgtatctggaggcaatcgcggc
gaagctttagtgaaacttaaggactgcttgtctaactttcaggtagcaggtgtacctaca
aacataaatttccttcaaaaacttgctagtcacaaagagtttgcagtgggcaacgtagaa
actcattttatagagcaccatagaaccgatctattcgctgatgaaagcaatccagctgca
gcggaaatggcatacaaggcagctaagcatagtgcagctttggtagctgcttgtgtatcc
gcaatcgagcattcttcttggaatgaaagtaaccatgggaagcttccatcaatatggcat
tctcatcctccttttagagtccatcatgaagccaagcaaacgattgagcttgagtgggac
aacgaatgcgagggaactggctcgaaccttgtatcactcggcgtaataaatcaaccagat
ggaagctatctcatacaggaaggcagtgattctccaagtttagaagtcagagtaactcga
gcaggaggaaactgcgattttagagttgaagcggccgggttgagcatgaacgttactata
gccgcgtacttgaaggatggttataaacacatccatatatggcgcggttcagaacaccac
cagttcaagcagaaggttgggattgaattctctggagatgaagaaggtgtccaacacaga
acgagctcagaaacatcatcacaccctccaggaaccgttgtggcccccatggctggtttg
gtagtgaaggtcctggtcgaaaacgaagccaaagtagatcaaggtcaaccagtattagtc
atggaggcaatgaagatggagcatgttgtgaaagcaccgtcttctggaagcatacaggac
ctcaaagttaaagcaggccaacaggtttcagatggaagtgctctattcaggatcaaaggg
taa
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