Brassica napus (rape): 106369287
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Entry
106369287 CDS
T04128
Name
(RefSeq) peroxisome biogenesis protein 6-like
KO
K13339
peroxin-6
Organism
bna
Brassica napus (rape)
Pathway
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106369287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106369287
Membrane trafficking [BR:
bna04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
106369287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
Rad17
AAA_lid_3
AAA_17
AAA_22
nSTAND3
NPHP3_N
AAA_18
AAA_28
RNA_helicase
AAA_33
TIP49
AAA_7
DUF815
TsaE
AAA_14
Parvo_NS1
ATPase
Mg_chelatase
AAA_25
IstB_IS21
AAA_2
AAA_24
PhoH
SLFN-g3_helicase
Vps4_C
Motif
Other DBs
NCBI-GeneID:
106369287
NCBI-ProteinID:
XP_048597954
LinkDB
All DBs
Position
A9:44502910..44507197
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AA seq
927 aa
AA seq
DB search
MVERRSPLVLSSTRATLRSVLNSLRPDEIPGRPDSRRRSVRLPAGILRWKRDGVNDSKFD
SLDESSLVGLSTQLLKRLSINSGSFVVINNIDIGIQRVAQVVVLDPPKTTLEDSSVTSLP
VSDSLHTMLVFPTFDMMSQQLLDQEVAYLSPMLAFNLSLHMSCLKSLVHRGNEVLEKYFV
AKFDEESASVAGESKIGLDLEPVSEVPGYASHLRVSFVKIPECGTIQSLVVSSSFEDEER
QGLIDSALNKYFGTDRVLSRGDVFRVCTEWNCGSSICVQCGQGLGSKEEDFIYFKVVAME
PSSERFLRVNHSQTALVLGGTVSSGLPPDLLVSSSKANMPLQVDTVNVLASVLSPPLCPS
ALSSKLRVAVLLHGLPGCGKRTVVNYVAKRLGLHVVEYSCHSLLASSEKKTSTALAQTFN
MARRYAPTILLLRHFEVFKNLGSQDGSQGDRVGVASEIASIIRELTEPVSNGEDSSMEEN
SNSNSSVDEGGKFRGHQVLLIASSESTEGLSPTIRRCFSHEIRMGSLNDEQRSELLSQSL
QDVSQLLNTSSDEFVKELVGQTSGFLPRDLRALVADAGANLFISKESETEKIDSLSGDVD
QSSQLGNGSERLKAKDDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKSSILDTV
QLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE
SEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSS
QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLY
LVAKKCPSTFTGADMYALCADAWFQAAKRKVLNSDSGDDSIPEDDPDSVVVEFIDFIKAM
DQLSPSLSITELKKYEALRDQFQGRSS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggttgagagacggagtcctctggtgctctcatccaccagagctactctccgttcagtc
ctgaattcgcttcgacccgacgagattccgggcagacccgattcgagacggcggagcgta
aggttgccagctggcattctcaggtggaaacgagacggagtaaatgattcaaaatttgat
tctttagatgaatcctcactggtcggactctccactcaattgctcaagagactttccatc
aactctggctctttcgttgttatcaacaacatcgacataggcattcaacgggttgcgcaa
gttgttgtacttgatcctcccaagacgacgcttgaagattcatctgtcactagcttacca
gtttcggactctcttcacacaatgcttgtcttccccacttttgatatgatgagtcaacag
ttactagaccaagaggttgcttacttgtctcctatgttagcttttaatcttagcttgcac
atgtcttgcctgaagtccctagtacatcgagggaacgaagtcttagagaagtactttgtt
gctaaattcgatgaagagtcggcgtcggtggcgggtgagtcaaagattggtttggatttg
gaacctgtgtccgaagttccagggtatgcgtcacatctaagggtttcttttgtaaagatc
ccggagtgtggtaccattcagtcattggtagttagttcctcgtttgaagatgaagagaga
caagggttgatagattccgcattgaacaagtattttggaactgatagagtactctcaaga
ggcgatgtgtttcgagtttgcactgagtggaactgtggttcaagcatttgtgttcaatgt
ggtcaagggttaggctccaaagaagaggactttatctatttcaaggtcgttgcgatggaa
ccttctagtgagaggtttcttagagtcaatcactctcaaaccgctcttgtacttggtgga
acggtctcttctggtcttccaccagatttgcttgtttctagttcaaaggctaatatgcct
ttgcaggtggacacagtaaatgtattggcgtcggtgctttccccacctctctgtccatca
gcactctcatcgaaactaagggttgctgttttactccatggcctgccagggtgcgggaag
agaactgttgtcaactatgtagctaagaggttgggcctgcatgtagttgaatatagctgc
cacagtttgttagcatcatccgaaaagaaaacatctactgctttggctcagacttttaat
atggcacgaaggtacgcaccaacgatactactgctccgccatttcgaagtttttaaaaat
ctgggatctcaggacggctcacagggtgatcgagttggcgtggcctctgagattgcttcg
attattagggaactgactgagccagtttctaatggtgaagacagttccatggaagaaaac
tcgaatagcaattcctctgtagatgaaggtgggaagtttaggggacaccaggtgctgtta
atcgcatcttccgaaagcactgaaggtctctctccaacaatcaggcgttgctttagccat
gagatacggatgggttctctaaatgacgagcagagatccgagttgctgtctcagtccctc
caagatgtttctcaactccttaataccagctcagatgaatttgtgaaagaattagttggt
cagacttctggtttcctccctcgggacttgcgtgctttagtcgctgatgctggtgccaac
ttattcatcagtaaagagtccgagactgagaagattgattctctatcaggtgatgtagac
cagtcaagtcaattaggtaacggcagtgagagattaaaagctaaggatgacttcactaaa
gctttggaccgatcaaagaagagaaatgcatcagcccttggtgctcctaaggttccgaat
gtgaaatgggatgatgttggtgggcttgaggatgtgaagagttcgatactggacacagtt
cagttacctctcctgcataaagatttattttcatctggactacgtaaacgttccggtgtg
cttctctatggtcctccaggaacagggaaaactttactggcaaaagctgtggctacagag
tgttccttaaacttcctcagcgttaaaggtccagagctgatcaacatgtacattggcgag
tcagagaaaaacgttcgagatatcttcgaaaaggcgagatcggcgcggccgtgtgtgatc
ttctttgatgagcttgactctcttgctccagcgcgaggcgcttctggtgattcaggagga
gtgatggaccgagtggtctctcagatgcttgcagagattgatggactgagcgattcttcg
caggatctgtttattataggagcgagcaacagacctgatttgattgatccagctcttctg
cgacctggaagattcgacaaacttctttatgttggagtcaatgctgatgcgtcttacaga
gaaagggtattaaaagcacttactcggaaatttaagttgagcgaagatgtgtcgctttat
ttagtagcgaagaagtgtccgtctacgttcacgggagctgatatgtatgcgttgtgtgct
gatgcttggtttcaggcagctaagcgaaaggtgttgaattcagattcaggggatgattct
attccagaagacgatccggactctgttgtagtagagtttatagattttataaaggcgatg
gatcagctttcaccatcactctccataactgaactgaagaagtatgaggcgcttcgagac
cagttccaaggccgttccagctga
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