Brassica napus (rape): 106369766
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Entry
106369766 CDS
T04128
Name
(RefSeq) protein argonaute 9-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106369766
03036 Chromosome and associated proteins [BR:
bna03036
]
106369766
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106369766
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106369766
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106369766
microRNA pathway
RISC loading complex
106369766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
106369766
NCBI-ProteinID:
XP_048599037
LinkDB
All DBs
Position
A10:13448565..13453792
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AA seq
882 aa
AA seq
DB search
MDPNKSTHLQMARSGNGSRGQKIDLLTNHFGVNFTTSKSQHFFQYSVAITYEDENPVEAK
GIGRKILAKVQETYQTDLGSKHFAYDGDKTLFTVGPLPNNKLDFSVVLEDMSCTRSNTST
SDANTKRLRPHNQSKRFNVAISFAAKISMQAIQGALQGKETNDLQDAVRVLDVILRQNAA
TKGCLLVRQSFFHNDAKYFSNNHGGFHLCRGFHSSFRATQGGLSLNIDVSSTLIVSPGPV
IDFLVLNQEVRDPSSIDWKKAERSLKNLRVKVDPSNREYKITGLTRLPCRDQTFLWKKKQ
GNGETKEVEVTVYDYFTKHLEIELRHSGGLPCISVGKPKRPTYFPIEQCHLVSLQRYTKA
PTIFQRSKLVKESVQKPQEKMNMLNNAIKDSGYNNDPMLQDCGVRIDSDFTQVEGRVLPT
PRLKVGNGEEFQPRDGRWNFNNKKLVEPATVTRWAVVNFSARCDTKRLISDLIRCGRMKG
INVDPPYKVVFQEDPNYRGAPANIRVEKMFEQMQSELRKEGIEGRPKFILCILAEKKNSL
VYGPWKRRNLVEEGIVTQCIAPTPKINDQYLTNVLLKINAKLGGLNSLLAMERSPRAMMP
LVTQVPTFIVGMDVSHGSPGQSDIPSIAAVVGSREWPLISKYRACVRTQSRKVEMIDSLF
KPVTNEKGKQVDEGIFWELLFDFYISSGKKRPEHIIIFRDGVSESQFNQVLSIELDQMMR
ACKFVEENWEPKFTVIIAQKNHHTKFFQAEGPGNVPPGTIIDSKICHPRNNDFYLCAHNG
MIGTTRPTHYHVLYDEIGFSTDDLQELVHSLSYVYQRSTTAISVVAPIMYAHLAAAQMAT
AVKFEDSSETSSSHGGITTSEAVPVSPMPKLNVDVASSMFFC
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaacaagagtactcatcttcaaatggctcggagtggtaacggttctagagga
cagaagatcgatctgcttactaaccactttggagtcaacttcaccacatcaaaaagtcaa
catttcttccaatacagtgtcgctatcacatatgaagatgagaatccagttgaagccaag
ggtattggcagaaagattcttgcaaaagttcaagaaacttatcaaactgatttgggttcc
aaacactttgcttatgatggcgacaagactcttttcactgttggtcctcttcccaacaac
aaactagacttctctgtcgttcttgaagacatgtcttgtaccagaagcaacaccagtacc
agtgacgccaacacgaaaagattaaggcctcataatcaatccaaaagattcaatgttgca
atcagctttgctgcaaaaatctcaatgcaagctattcaaggtgctcttcaaggaaaggaa
acaaatgatcttcaagatgctgtaagagtgttggatgttatcctgcgccagaatgcagct
accaaaggttgtcttcttgtccgtcaatctttcttccacaatgacgcaaaatacttttca
aacaaccatggaggttttcatctatgcagaggattccattcaagcttcagagctactcag
ggaggcttatccctcaacattgatgtttcttctacattgatagtatcacctggtcctgtt
attgatttccttgttttaaatcaagaagtgagagatccatcctctatcgactggaaaaag
gctgaacgtagtctcaagaatcttagagttaaagtcgacccctcgaatcgagaatacaag
ataaccggactaactagacttccttgcagagaccaaacgtttctttggaagaaaaagcaa
ggaaacggggaaactaaggaggttgaggttacagtgtatgattacttcactaaacatctt
gaaattgaactgcgtcattcaggtggcttaccttgcatcagtgttggtaagccaaaacgt
cctacttactttcccattgagcaatgtcatcttgtttctcttcaacgctatacgaaagct
cctacaatttttcagaggagtaaacttgtcaaagaatcagtacagaaaccacaagaaaag
atgaatatgttaaacaacgctattaaggacagtggttataataatgaccctatgttacaa
gactgtggtgtcagaattgactctgacttcactcaagtggaaggccgcgtcttaccaaca
ccaaggctgaaagtaggcaatggagaggagtttcaacctcgcgatgggcgttggaacttc
aataataagaaacttgttgagccagctactgttactagatgggctgttgtgaacttctct
gctcggtgtgatacaaaaaggcttatttctgacttgattagatgtggaaggatgaaagga
atcaacgtagatcctccatacaaagtcgtatttcaagaagatcctaattataggggtgca
ccagccaacatcagagtagaaaagatgttcgagcagatgcaatctgaactcagaaaagaa
ggaatagaaggaaggccaaaattcattctttgtattcttgccgaaaagaaaaactctctt
gtttatgggccttggaagaggagaaatcttgttgaagaaggaattgtgactcagtgtatt
gctcctacccccaaaataaatgatcaatatctcacaaatgttctcctcaagataaatgcc
aagcttggtggactgaactccctgttagctatggagcgctcaccacgagcaatgatgcct
ttagtaacgcaagttcctaccttcattgttggcatggatgtatcccatggttcccctggc
cagtctgacataccatcaattgccgcggttgtggggtccagagaatggccactcatctca
aaatatagggcatgtgtgcgcacacaatctcggaaagtggaaatgattgatagtctcttc
aaacctgtcaccaacgaaaagggaaaacaagtagatgaaggaattttctgggagctcttg
ttcgacttctacataagctcggggaagaagagacctgaacacattatcattttcagggat
ggtgtgagtgagtctcagttcaatcaagttctcagcattgaattggatcagatgatgcgg
gcatgcaagtttgttgaagaaaattgggaacccaagttcacagtgatcattgcccagaag
aaccatcacaccaagttcttccaggctgaaggccctggcaatgttcctccaggaacgata
attgatagcaagatttgtcacccacgcaacaatgacttctatctctgtgcccataatgga
atgattggaactacaaggccaacacattaccatgtgctctatgatgagattggattttcg
acagatgacctccaagaacttgttcattctctatcctatgtctaccagcggagcacaact
gccatctctgtagttgcgcctataatgtatgctcatttggcagctgcacagatggcaact
gcggtgaagtttgaggacagctccgagacttcatcgagccatggtgggatcacaacatct
gaagcagtacctgtctctcccatgccaaagctgaatgtggatgttgcaagctctatgttc
ttctgttga
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