Brassica napus (rape): 106370555
Help
Entry
106370555 CDS
T04128
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106370555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106370555
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106370555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
106370555
NCBI-ProteinID:
XP_013666008
UniProt:
A0A817B5R8
LinkDB
All DBs
Position
A10:15714117..15718161
Genome browser
AA seq
714 aa
AA seq
DB search
MNKIRSLRFLLPETITSAASNRGSVAVRYGSQVLPWRHQILDPDSNIVTYWNHVFLVTSI
LALFLDPFYFYAPYVGGPACLSVDVGLAATVTFFRSVADLFHLLHIFMKFRTAFVARSSR
VFGRGELVRDPREIAMKYLKSDFIVDVAAMLPLPQLVIWLVIPAATNGTANHANSTLALI
VLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQ
FSCWSKVCEKDHALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSHCDATSSTTNFKFGM
FAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFT
LLIGNMQTSLQSMSVRVEEWRIKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDE
ESILQSLPTDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREG
DPVDEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNFPSSTR
SVRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYK
RRKLAKELSLHESSGYYYRDETGYNEEGDEENYYGSDDDDFEGERLSVDNTNNSQNLGAT
MLASKFAANTRRGTNQKASSSTSAGKKDGSSNSLKMPQLFKPDEPDFSMDKEDV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatccgctctctccgcttcctcctccccgagaccataacctccgccgcgtcc
aaccgaggatctgtcgccgtacgctacggcagccaagtccttccatggcggcatcagatc
ctggacccggacagcaacatcgtcacctactggaaccacgtcttcctcgtcacctccatc
ctcgccctcttcctcgaccctttctatttctacgcgccttacgtcggcggccccgcgtgt
ctctccgtcgacgtcggactcgccgcgacggtcacgttcttccgctcggtggccgatctc
ttccacctcttgcacattttcatgaagttcagaacggccttcgtcgcgcggagctctaga
gtttttggacgcggtgagctcgttagggatccgagagagatcgctatgaagtacttgaag
agcgatttcatcgtcgatgttgccgccatgcttcctcttcctcagcttgtaatttggcta
gtaattccagccgcaaccaacgggactgctaatcatgccaatagcactctcgcccttatc
gttctcgtccagtacattccaagatcattcatcatattcccacttaaccaaaggattata
aaaacaaccgggttcatcgccaagactgcttgggcaggagctgcatacaatctcctcctc
tacatcttagctagtcacgtgttgggagcaatgtggtatctatcatcaattgggcggcag
ttctcatgctggtccaaggtatgcgagaaagatcacgccctgagggttttggactgtctc
cctagcttcttggactgcaagagtctagaacaacctgagcgtcagtattggcagaatgtt
actcaggttctttctcattgtgacgctacaagcagtactaccaatttcaagtttggcatg
tttgctgaagcctttaccactcaagttgctaccacggacttcgtgtccaagtacttatat
tgtctttggtggggtttaagaaatctaagttcttatggccagaatataaccacaagtgta
tatcttggcgagaccttgttctgtattacaatatgtatttttgggttgattctcttcacg
ctcctgattggtaacatgcaaacatcattacaatccatgtcggtaagagtagaggaatgg
agaattaagagacgagacactgaagaatggatgagacatcgtcaactacctccagagctt
caagaacgtgtccgtagatttgtccaatacaagtggcttgcaactagaggcgtggatgaa
gaatcaatcctccagtctttacccacagacttacgccgagagatccaacgccacctctgt
ctcgctcttgtccgcagggtccccttcttctcacaaatggacgatcaacttcttgacgct
atatgcggatgccttgtctcatctttaagcacggcagggacctacatattccgtgaaggt
gatcctgttgatgagatgctctttgtgattagaggacaaatagagagctcaactacaaac
ggaggaagatctggtttctttaactccactactctaagacctggtgatttctgtggagaa
gagcttcttacatgggccttgatgccaaactctacactcaactttccgtcttcaacccga
agcgtccgtgcactctctgaggttgaagcatttgccttaagcgcagaggatcttaagttt
gttgctcatcagttcaaacgtcttcaaagcaaaaagttgcaacacgctttcaggtactac
tcacatcagtggcgagcatggggagcttgttttgtgcaatccgcatggagaagatacaag
cgacgaaagctcgctaaagagctcagcttgcacgagagtagcggatactattacagagat
gaaacaggatacaacgaagaaggcgacgaagaaaactactatggaagcgacgacgatgat
tttgaaggtgagagactgtctgtggacaacacaaacaacagccaaaaccttggagcaaca
atgttggcgtctaagtttgcagcaaacacgagaagaggcacaaatcaaaaggcttcaagt
agtactagtgctggtaagaaagatggatcttcgaacagtttgaaaatgccccaactattt
aaacctgatgagcctgatttctctatggataaagaagacgtttaa
DBGET
integrated database retrieval system
