Brassica napus (rape): 106371280
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Entry
106371280 CDS
T04128
Name
(RefSeq) CLP protease regulatory subunit CLPX2, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106371280
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP100
106371280
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
MCM
AAA_5
Sigma54_activat
Mg_chelatase
AAA_22
Sigma54_activ_2
RuvB_N
AAA_16
IstB_IS21
ABC_tran
T2SSE
AAA_14
AAA_18
DEAD
AAA_7
nSTAND3
NACHT
TsaE
AAA_28
AAA_29
Motif
Other DBs
NCBI-GeneID:
106371280
NCBI-ProteinID:
XP_013666781
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Position
A10:complement(9035493..9039578)
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AA seq
581 aa
AA seq
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MLSISRFLSRKTCLVSRSFRLILSADIPLQRPTSNTTLTPTPFFSSRRSIYDSSGGDYDY
IRSDVNCPRCSAHMLVVFSNRPLSLTAREPGIYQAVNFCPQCKSAFYFRPFKLSPLQGSF
IELGKVKKGADDEDDDDDDGDDRSWKIQGLKNEDDSDSSNGAVKLPTPKEICQGLDQFVI
GQDKAKKVLSVAVYNHYKRIYHSSKIKGSGSESVNFVMEDDDDDDSIDLVELDKSNVLLL
GPTGSGKTLLAKTLARLVNVPFAIADATSLTQAGYVGEDVESILYKLYVEAGCNVEEAQR
GIVYIDEVDKMSMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSI
QMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMNTSGFSSSAVTSSLLESLQ
SEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPRSALGKQYKKLFRMNNVQLHFT
EGATRLIARRAMSKNTGARGLRSILESILTEAMFEVPDSKSEGSQSIKAVLVDEEAVGSV
GSPGCGAKILKGDDVTQQHFEQTESNVSVVQHVLTRVFCES
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccatctcgaggtttctgtcgaggaagacatgtcttgtctcccgcagtttcaga
ctcattctctccgccgacatccctcttcaacgccccacttccaacaccacccttacccct
acccctttcttctcctcccgccgtagtatttacgactccagcggcggtgattacgactac
atcagaagtgacgtcaactgccctcgttgctccgcccacatgctcgtcgtcttctccaat
cgtcctttgtccctcactgccagagagcctggcatctaccaagccgttaacttctgtccc
caatgcaagtccgctttttacttcaggcccttcaagctctctccccttcaaggcagcttt
atcgagcttggcaaggtcaagaaaggtgctgatgatgaagacgatgacgacgacgacggt
gatgacagatcttggaagattcaaggtctcaaaaacgaagatgattcagatagcagcaac
ggcgctgtgaagcttccgacacctaaggagatctgtcaggggcttgaccagtttgtcatt
ggtcaggataaggcaaagaaggttctctctgtcgctgtttacaatcattacaaaagaata
tatcattcttccaagataaaagggtctggttcagaatcagttaactttgttatggaggat
gatgatgatgatgatagcattgatctcgtggagttggataagagcaatgtgttgttgctt
ggccctactggttcaggaaagaccttactggcaaaaactttagcgcgtcttgtcaatgtt
cctttcgccattgctgatgccacttcattaacccaggcaggttatgtcggtgaagatgtg
gaatcaatactctacaagctatatgtggaagctgggtgcaatgtagaagaagctcaaagg
ggtattgtgtacattgatgaagttgataagatgagcatgaagtctcatagctcaaatggt
ggtagagatgtttctggagaaggtgtgcagcagtcattgctgaaattgctggaaggaact
gtggtcagtgtcccgattccagagaaaggattacggagagatcctcgaggagatagcatc
cagatggatacaaaagacatcctttttatttgtggtggagcatttatcgatctggagaaa
actgtttctgaacggcaacacgatgcctctattggttttggtgcttcggttcgtacaaac
atgaacacttctgggttcagtagttccgcagtaacatcctcattgttggaatctttacaa
agtgaggatcttgttgcgtatggtctcattcctgagttcgttggaagactacccatctta
gtgagcttatctgcactaaatgaagaccagcttgtacaggttctaacagagcctaggagt
gcattgggcaaacagtacaagaagttgtttcgcatgaacaatgtccaactacattttact
gaaggtgcaacgagacttatcgcgaggagggccatgtcaaagaacacaggtgcacgtggc
ttacggtctatacttgaaagtatcctcacagaagcaatgttcgaggtaccagatagcaag
tcagaaggatcacagagtataaaggcggtcttggtggatgaagaggctgttggttcagta
ggatcaccaggatgtggtgcaaaaatccttaaaggagatgatgttacgcaacaacatttt
gaacaaacagagtcaaatgtaagcgtcgtgcaacacgtgctaacaagagtattttgcgaa
agctga
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