Brassica napus (rape): 106371307
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Entry
106371307 CDS
T04128
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106371307
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106371307
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GFIT
Motif
Pfam:
Glyco_hydro_28
CBM_3
Motif
Other DBs
NCBI-GeneID:
106371307
NCBI-ProteinID:
XP_022546313
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Position
A1:complement(2878410..2882644)
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AA seq
415 aa
AA seq
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MKCLKTLFSMIILVSCHLEYGDGRRILRIKDFITDTNHKNVDYSQVFQKAWKGLCEGEGE
GTGGSSLVINENEKYTIQPQLFEGPCVSSYIHIQIDGKIEAPKRPKQWGNKRTESWLMFK
NVESLFINGSGVLDPHGENWWRSVRHSKRPRTLSFKQCTDIIYNGLTQYNSPKNHISVYG
CTNATLSNLTLLAPEKSPNTDGIGISLSHNIRILDSSIQTGDDCIAITGGRGGSSDINIT
RVACGPGHGISIGSLGKGDIDDTVENVIVRSCSFWGTQNGARIKTWHGGKGLAKNILFEN
ITVTNTKYPIIIDQHYSNGGTGHVKGNAVKVSDVTFRYIEGTSASKIAIKLDCDENQGCH
NIVMEHIKLTSAKPGKKLSAYCKFADVKASFVNIHINCGLYPQLLLLFSPLPKII
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgaaaacattattctcaatgattatacttgtatcgtgtcatctggaatac
ggagatggccggaggattctaaggatcaaagatttcataactgatactaaccataaaaac
gttgactattcacaagtatttcaaaaagcatggaaagggttatgcgaaggtgaaggtgaa
ggaactggcgggtcatcgctagtgataaatgagaatgaaaaatacactatacaaccacaa
ctgtttgaaggtccatgcgtatcttcttacattcatattcagatcgatgggaaaatagaa
gcgccgaagagaccaaaacagtggggaaacaaacgaactgagagttggttaatgttcaag
aacgtggagagtctcttcatcaacggctcaggtgtccttgacccccatggagaaaattgg
tggcgatctgttcgtcactctaaacgacccagaacacttagctttaagcaatgcaccgac
ataatatataatgggctaactcaatacaatagtccaaagaatcacatttcagtctatggt
tgcaccaatgcaactttatcaaatcttactttgctagcacccgagaagagtccaaacact
gacggcattggtatttctctttcacacaatattcgtatcttagactcgtctatccaaact
ggtgatgattgtattgcaattactggcgggcgtggtggttcttccgacatcaacattact
cgtgtggcatgtggtccaggtcatggtatcagcattggaagtttggggaaaggtgatata
gatgacactgttgagaacgtgatcgtaagaagctgcagcttttggggaactcaaaatggg
gcaagaatcaagacttggcatggaggaaaagggttagccaagaatatattatttgaaaat
attacggtaacaaatactaaataccccataatcatcgatcaacattactctaatggtggc
actggtcatgtcaaggggaatgcggtgaaagtaagcgacgtaacattcagatatattgaa
gggacttcagcaagtaaaattgcaataaagctagactgtgatgaaaatcaagggtgtcat
aacatcgtgatggaacatatcaaactcacatctgcaaagccggggaagaaactctctgca
tattgtaaatttgcagatgtgaaagcttcattcgttaacatccatataaactgtggttta
tatcctcaacttttgctgttgttttctcctcttccaaaaattatttag
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