Brassica napus (rape): 106371538
Help
Entry
106371538 CDS
T04128
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bna
Brassica napus (rape)
Pathway
bna03020
RNA polymerase
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106371538
09124 Replication and repair
03420 Nucleotide excision repair
106371538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106371538
03400 DNA repair and recombination proteins [BR:
bna03400
]
106371538
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106371538
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106371538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
106371538
NCBI-ProteinID:
XP_013667076
UniProt:
A0A078HFV5
LinkDB
All DBs
Position
A7:complement(3924347..3925875)
Genome browser
AA seq
319 aa
AA seq
DB search
MDSGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLD
VTSKDLYSADPTVTPVDFGDSSGADSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW
SPAATVTFMYEPDIIINEDMMDTLTDDEKIDLIESSPTKVFDFDAVTRQVVVVDPEAYTY
DEEVIKKAEAMGKQGLIEIRPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtgccacttaccagagattcccaaaggtgaagatccgtgagctgaaagat
gactacgccaagttcgagcttcgtgacaccgatgtctccatggcgaacgctctccgtcgc
gttatgatctccgaggtccccacggtcgcaatcgatctggtcgaaatcgaggttaattcc
tctgttctcaacgacgagttcattgctcatcggttaggtctcatccctctcaccagcgag
cgtgcgatgagcatgcgcttctctcgagactgcgatgcttgcgacggagacggacagtgc
gagttttgctctgttgagtttcgtcttagcgctaaatgtgtcactgaccaaaccctagat
gttactagtaaggatctgtacagcgctgatcctactgttactcctgttgatttcggtgat
tcatctggagctgattcaagcgagcaaaggggaatcatcatagtgaaactgagacgtgga
caagaactgaagcttagggcgatagcgaggaaaggaatcgggaaagatcacgctaaatgg
tctcctgcagccactgttacgttcatgtatgagcctgacattatcatcaatgaagatatg
atggacactttgacagacgacgagaagattgacttgattgagagcagcccgaccaaagtt
tttgactttgatgctgtcaccagacaggttgtggtggttgatccagaagcatacacttac
gatgaagaagtgatcaagaaagcagaagccatggggaaacaagggctcatcgagatccgt
ccgaaagatgacagtttcatattcactgttgaatccacaggtgcagtgaaggcttcgcag
ctggtactgaatgccattgatctcctgaagcagaagctcgatgcagtccgtctctcagac
gacactgttgaagctgatgatcagtttggcgaactaggtgcacatatgcgtggaggatga
DBGET
integrated database retrieval system
