Brassica napus (rape): 106371571
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Entry
106371571 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106371571
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106371571
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106371571
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106371571
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106371571
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
106371571
NCBI-ProteinID:
XP_013667105
LinkDB
All DBs
Position
A10:complement(11515240..11519703)
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AA seq
986 aa
AA seq
DB search
MEIQTDQDGSCAAVSSSSASAVFRKIEFHLARKPFNGFSSRGSDFKMETLNPSSSSNNRA
FSSPSVKKVDGPDSLDRELTFTKTIRKIGAGLENLGNTCYLNSVLQCLTYTEPLAAYLQD
VAHEQRCRVAGFCALCAMQRHVRTALQSTGRSLAPKYLVSNLRCVSQNFRKCRQEDAHEY
MINLLECMHKCCLASGVPSESSDAYRSSLVHKIFGGSLRSQVKCAQCSHCSDKFDPFLDL
SLDISRADSLQRALLRFTAVELLDNGSKVYQCERCKQKVKAVKQLTVFKAPSVLTVHLKR
FEAYRSEKIDKKVEFPPAIDMKPFVSGPYEGNLKYTLYGVLVHCGGSIHSGHYYCFVRTS
SGMWYSLDDNEVIQASEKTVFNQKAYMLFYVRDRQNTAPKNPVTVAKNETSKESVAVNRA
SLIVSSNRNDQVNGSTVIKACSLNTSVANGTAPLRACDKGSPACLTPKDVNAKDPPSSVE
GKEILEGQNGTAPVKSNDQGAPAVLIQKDKENPKDPLSSVEAKEILKMENSTAPPSESRD
QGAPAVLTQNELSVVAANVTSPLRSCEQGAPAVLTPKDLNAKETQTNPPSSVERKENVER
PCDVGSPVVLTQRDLINTKTLHKEESLPQANGEGSLVKEDSKAACTVIPGKASPLLDNST
NTQILVNLPTSVGKAENSVDEKNSANKLNESDTSLKVKNGNSPMEEAVLDNQTLLHQSEE
SATESIKQTSVDETLTTPRKTRKRNKKTVQVGLSFFKLALGVRKKKKQKRGRSSTLAVKK
GTSEELLSKKRATDQERSTPLITSKAASGSACLHGKGKSVSVDNERIRTSNGNMLLASPI
VELKERTNQNGAVLASDQQQPLKSSDLSEASQNAKRKRDNSKEEQILSQKEQVTILTRGL
PETVVAKWDEEVSAFKMGSSESTRIGYVADEWDEEYDRGKKKKIRIKEEMYVGPNPFQAF
ASKKQQTDTKKKWTQGRNTAKTGFRI
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggagatccagacggatcaagacggatcttgcgccgccgtttcgtcctcttccgcctca
gccgttttcagaaagatcgagttccacctcgcgaggaaacccttcaacggcttctctagc
cgcggctccgatttcaagatggagactttgaatccctcctcctcttctaacaacagagcc
ttctcatcaccctccgttaagaaggtggacggtcccgattcgttggatcgggagcttact
ttcaccaaaaccatccgcaaaatcggtgctggtttggagaatctcgggaacacatgttat
cttaactctgtgttgcaatgtttgacgtacactgagcctttagctgcttacctgcaagac
gtcgcgcatgagcaacgctgccgtgtggcgggtttttgtgctttatgtgcaatgcagaga
catgtcaggactgctcttcaatctactggcagaagcttagcacctaagtatttggtctct
aacctgcgatgtgtatctcaaaacttcaggaaatgtaggcaggaagatgcacatgagtac
atgatcaatttgctggagtgtatgcacaagtgttgtctggcttctggtgtaccaagtgaa
tcctctgatgcttacaggagcagcttggtacataaaatttttggtggtagcctccgtagt
caggtgaaatgtgcacagtgttcccattgttccgacaagtttgatccatttcttgacctg
agcctagacatttcgagggcggattcattgcagagagcacttttacgtttcactgcggtt
gagctcttagataatggttcaaaggtttaccagtgtgaaagatgcaagcagaaagttaag
gctgttaaacagcttactgtttttaaagccccttctgttctgactgtacacctgaagcgg
tttgaagcgtatagatccgaaaaaatcgacaagaaagtcgagtttccccctgcgatcgac
atgaaacctttcgtcagtggtccatatgaaggtaatttgaagtacactctatatggtgtg
ttagttcattgtggtggaagtatccattctggtcactactactgctttgttcgcacttca
agtggcatgtggtattcccttgatgataacgaggttatccaagctagtgagaagactgtg
ttcaaccagaaggcgtatatgcttttctatgttcgtgatagacaaaatacagccccaaag
aatcctgttaccgtggctaagaatgaaacttccaaagagagcgtcgccgtaaacagagct
tctttgattgtatcttctaacagaaatgatcaagttaatggttcaacagtcatcaaagca
tgtagtttaaacacttctgttgccaacggtacagcacccttgagagcgtgtgataaaggt
tcgcctgcttgcttgaccccaaaagatgtgaatgcgaaagatcccccaagcagtgtggag
gggaaagagatcctggaggggcaaaatggtacagcacctgtgaaatcaaatgatcaaggt
gctcctgctgtcttaattcaaaaagataaagagaatccgaaagatcccctgagcagtgtg
gaggcaaaagagatccttaagatggaaaatagtacagcaccaccctcggaatcacgtgat
caaggtgctcctgctgtccttacccaaaacgagttaagcgttgttgctgccaatgttaca
tcacccttgaggtcatgtgaacaaggtgctcctgctgtcttgactccaaaagatttaaat
gccaaagagactcagacaaatcccccaagcagtgtggagagaaaagagaacgttgagaga
ccctgtgatgtaggttctcctgtagtcttaactcagagagatttaattaataccaagacc
cttcacaaggaagagtcacttccacaggccaatggggaaggatctttggtaaaggaggac
tcaaaggctgcatgcacagtgataccaggaaaggcttctcctctcctggataacagcaca
aacactcaaattcttgtgaatttgcctacttctgtgggtaaagctgaaaatagcgttgac
gagaagaactctgctaataagttgaacgagtctgacacttcacttaaggttaaaaatggt
aattcacctatggaagaagctgttcttgataatcagactttgctacatcagtcggaagaa
tcggcaacagaatcaataaagcaaacatctgttgatgagactctcaccacaccaagaaag
actcgcaagcgtaacaagaaaaccgtgcaggtggggttatcatttttcaagctggcactt
ggcgttcgtaaaaagaagaaacaaaagaggggaagatcaagcaccttagctgttaagaag
ggtacgtctgaggagcttttatccaagaaaagagctacagatcaagagcgttccactcca
ctgataactagcaaagctgcttctggctctgcttgcttgcatgggaagggtaaaagtgtc
agtgtcgataatgaaaggataaggactagtaatgggaatatgctgcttgcctctccaatc
gtagagctgaaggagagaactaatcaaaatggtgccgttcttgcgtcagaccaacaacaa
ccgttgaagagttcggacttgtctgaagcaagccaaaacgccaaaagaaagagagacaat
tcaaaagaagaacaaatattgtcacagaaagaacaggtgaccattctcacgaggggtttg
ccagagaccgttgttgccaaatgggacgaggaagtttctgcttttaagatgggaagtagt
gaaagcacgagaattggatatgtagcagatgaatgggatgaagaatatgacagagggaag
aaaaagaagatacggatcaaagaggagatgtatgtagggccgaacccgttccaggcgttt
gcatcgaagaaacaacaaactgatacaaagaagaaatggacacaaggcaggaatactgca
aagacaggcttccggatatga
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