Brassica napus (rape): 106371580
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Entry
106371580 CDS
T04128
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106371580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106371580
03036 Chromosome and associated proteins [BR:
bna03036
]
106371580
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
106371580
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
106371580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
RMC1_N
Beta-prop_RIG_1st
Tricorn_2nd
Beta-prop_IFT122_1st
CFAP43_N
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
106371580
NCBI-ProteinID:
XP_048610420
LinkDB
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Position
C4:13886233..13890747
Genome browser
AA seq
439 aa
AA seq
DB search
MNAGMNWKEHGRKIPKENLDRFIPNRSAMDFDFAHHALTEALIEARDGKKKEARELSPSK
EAYRKRLAETLGLNRTRILAFRNKPQPPLHSHYHSASLHQQPLKPRRRRIPQSCSKVLDA
PNILDDFYLNLLDWGSRNVLAIALGHTLCLWDASTGSVSEFVTIEEDQGPITSISWAPDG
SHVALGLNNSQVQLWDSSSIRKIRTLNGVHHSRVGSLAWNNHILTTGGMDGKIINNDVRI
RSHVVGTYRGHTGEICGLKWSGSGMQLASGGNDNVVHVWDRSSASSRWLHRLEEHTSAVK
ALAWCPFQSNLLATGGGGTDGAIKFWNTHTGACLNSVDTGSQVCDLLWSKNDRELLSSHG
FSQNHLALWKYPSLVKMAELTGHTSRVLYMTQSPDGSTVASAAGDESLRFWDVFGMPDTA
KKPDQKAAHEPFSPVPRIR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaggtatgaactggaaggaacatggtcggaagattcccaaggaaaatctggac
agattcataccgaacagatcagctatggatttcgactttgctcatcacgccctcaccgaa
gccctaatcgaagcaagagacggcaaaaaaaaagaagcgcgggagctttcaccctccaaa
gaggcttacaggaagcgtctggcggaaacgctcggtctcaaccgcacccgtattctcgcc
ttcaggaacaaacctcaacctcctctccactctcattatcactctgcttctcttcaccaa
caacctctaaagcctcgccgccgacgcattcctcagtcttgtagcaaagtcttggatgct
cctaacattcttgacgacttctacctcaacttgcttgactggggttctcgtaacgtctta
gctattgccttgggccacactctttgcctctgggatgcttctaccggctctgtatccgag
ttcgtgaccattgaggaagaccaaggacccatcacaagcataagctgggcacctgatggt
tcccacgttgcacttggcctcaacaactctcaagtccagctttgggattcttcatccatc
cgcaagataagaactttgaacggtgtccaccactctagagtaggatcacttgcatggaac
aatcacatcctcacaaccggaggaatggacgggaagattatcaacaacgatgtcaggatc
aggtcgcatgttgtgggaacttacagaggtcacactggagagatttgtggactcaagtgg
tcaggttctggaatgcagcttgctagtggtggcaacgataatgtggttcacgtatgggat
cgctcttctgcgtcttcgagatggctgcacaggcttgaggaacatacttctgccgtgaaa
gctcttgcttggtgccccttccaatcgaatttgcttgcaactggtggtggtggaacagat
ggggcgatcaagttctggaacactcacaccggagcttgcttgaactctgtagacacagga
tcccaagtgtgtgatttgttgtggagcaagaatgacagagagttgcttagctcacatggg
ttttctcagaaccaccttgcactttggaagtacccatccttggtgaaaatggctgagctc
actggccatacatcaagagttctgtatatgacacagagtcctgatggctctaccgttgct
tcagctgcaggagacgagagtttgaggttttgggatgtttttggaatgccagacactgcc
aaaaaacctgatcagaaagcagcccatgagccattttctcccgtgcctcgtatccgttga
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