Brassica napus (rape): 106371586
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Entry
106371586 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106371586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106371586
03036 Chromosome and associated proteins [BR:
bna03036
]
106371586
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106371586
Coactivators
SAGA/TFTC/STAGA complex
106371586
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106371586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
106371586
NCBI-ProteinID:
XP_013667121
UniProt:
A0ABQ8B252
A0A078GFI0
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All DBs
Position
C2:40746268..40751016
Genome browser
AA seq
787 aa
AA seq
DB search
MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSTNPPGNTHSPNQHFTATWKNDIG
DASMNLQTQHSLDSTQMKDQHGSALDGQHQHDLKRANEPQDLHRPGQHWDNPPQVPQTSG
LQISEKNPTGNEPERPHNQESESQFLKLQKMSSQQARGMEQPPVNPLNRNPKQVPFAALL
PTLMAQLDKDRALQLRTLYSRLKKNEIPKEGFTRHMKDIVGDQMLRLAVSKLQQVGYNQG
KMGIQAPSTEINNQKSQSDPRGVVHLNQLSSSTSSSVPVQGLTKHPPHQMQLPPSSFPMY
TSSGNIHSFNTNVSGSPLRPHLHDPHMRHVAHNQTMGSSGLGGPPQSTTNMMTMPKFERQ
TSVNDPSRVQGGATSHFQNSSSLPPGQGSSMSNVKQESVDQSFEQKNAASGASKEDLEKD
SSRNMAHASSVSPSSITTQLDASTAMNSRGPLGTSQAGVNARMPPKKPFVGQKKPLETSS
SPPSKKQKLVPNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGGKEDGRVSEASRRVVHEE
EEKLILQKIPLQKKLAEIMAKVGLKQISNDVERCLSLCVEERMRGLLSHIIRLSKQRVDT
EKSRHRTVITSDVRQQINEMNQKVKEEWEKKQAEAEKLKKPSESEEGDGGVDSEKEKEDN
RSKGLKGNKEDDDKMRTTAANVAARAAVGGDDTFLKWQLMAEARQKSVSESGKDGTQKAT
SSGGRTSKDKQDSGRRFTGVGGRRLGKNQGSSLQPKVVRTISAKDVVAVLEREPQMSKSI
LMYRLLQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcaattttcaaactcctcgaagaagacgaggatgaatcgatgcactcggga
gctgatgtggacgcgttccaggccgctctgaatcgagatattgaaggctctacgaaccct
cctggaaacacccattctcccaaccaacacttcacagctacatggaagaatgatatagga
gatgccagtatgaatctccagacgcagcacagccttgacagcactcagatgaaggatcaa
catggatcggctttagacggtcaacaccaacatgatttaaaacgtgcaaatgaacctcaa
gaccttcatcgaccaggtcagcattgggacaatcctccgcaggtgccccaaacatctggg
ttgcagatttctgaaaagaaccctactggtaatgaacctgaaagaccgcataatcaagag
agtgaatctcagtttcttaaactgcaaaagatgagtagtcaacaggctcgtggaatggaa
cagcctcctgttaatcctctgaaccgcaaccctaagcaagttccttttgctgctttgctt
cctaccttaatggcccaactcgacaaagacagagcgctgcagctccgtaccctttattcc
agacttaagaaaaatgaaatccccaaagaagggttcacccgacatatgaaggatattgta
ggcgatcagatgcttaggctagcagttagtaaactacagcaggtgggttataaccaggga
aaaatgggaattcaagctccttctactgaaattaataatcaaaagtctcagtctgaccct
cgtggagtcgtccaccttaaccaactatcttcgtcaacaagcagttcagttcctgtgcag
gggcttaccaaacatccgccgcaccaaatgcagcttccaccaagctcttttcccatgtat
accagctccggtaatattcactcattcaacaccaatgtttctggttccccattgagacca
caccttcatgatccccatatgagacatgtggcgcataaccagaccatgggatcatctggt
cttggaggaccgccacagtctacgacaaacatgatgactatgcccaagtttgagaggcaa
acttctgtcaatgatcctagtagggttcaaggtggcgctacatcgcacttccaaaacagc
tcatcactgccacctggtcaaggatcatcaatgtccaatgtgaagcaggaatcagttgat
caaagttttgaacagaagaatgcagcctcaggggcttcgaaggaggatttagagaaggac
tcctctagaaacatggcgcatgcaagctctgtttctccttcttccatcacaactcaacta
gacgctagcacagcaatgaattctcgtggtccattgggtacgtctcaagcaggagttaat
gctaggatgccacccaaaaagccttttgttggtcagaagaaacctcttgagacttcatcg
tcaccaccaagcaagaagcaaaaactggtcccgaattctatggatcaaagtattgaacag
ctcaatgatgtcactgcagtcagtggtgttaatctcagggaagaggaagaacaattattc
tctgggggaaaggaggatggtcgtgtttctgaagcatctcggagagttgtgcacgaagag
gaagaaaaactaattttgcagaaaattcctctgcagaaaaagctggctgaaattatggca
aaagtcggcttaaagcagataagcaatgatgttgaacggtgcttgtctttgtgtgtggaa
gaaaggatgcgaggactattatctcatataattcggttgtccaagcagcgagttgatact
gagaaatctagacaccggactgttatcacgtcagatgttcggcagcaaatcaacgaaatg
aatcagaaggtgaaagaggaatgggagaagaaacaggctgaagcagaaaagcttaagaaa
ccgagtgagagtgaagaaggtgatggtggagttgatagtgagaaggagaaagaagataac
cgttcaaagggtttgaagggaaataaagaggacgacgacaaaatgagaacgacagctgca
aacgttgctgctcgtgctgctgtgggaggagatgatacgtttttaaaatggcaattaatg
gcagaagcacgtcagaaatctgtatctgaatctggtaaagatgggactcagaaagctact
tcaagtggaggaagaacctccaaggacaagcaagacagtgggcgacggtttactggagtt
ggtggtcgaagattagggaagaaccaaggttcgtcgcttcaaccaaaagtggtgaggaca
atctcggcgaaggatgtggttgctgtcctggaaagagagcctcagatgtctaaatctatt
ctaatgtatcgattacttcaatag
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