KEGG   Brassica napus (rape): 106371612
Entry
106371612         CDS       T04128                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
bna  Brassica napus (rape)
Pathway
bna00900  Terpenoid backbone biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Module
bna_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    106371612
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     106371612
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     106371612
SSDB
Motif
Pfam: GcpE Sgf11 DUF7575 Zn_ribbon_9
Other DBs
NCBI-GeneID: 106371612
NCBI-ProteinID: XP_013667146
LinkDB
Position
A10:12646414..12650870
AA seq 741 aa
MATGVLPAPFSGVKISDSKLGFGKSLNIVRICDLRSLRSARRRVSVIRNSNQGSDLAELQ
PASEGSPLLVPRQKYCESLNKTVRRKTRTVMVGDVALGSEHPIRIQTMTTSDTKDITATV
DEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPAVALRVAEC
FDKIRVNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMY
VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCKRLA
NLGTKAAELQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMTVSL
DQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDHVARLALKRLIDVSMGVI
APLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSVRGDEPYEELEVLKSIDATM
ILHDVPFNEDNVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGAL
LVDGLGDGVMLEAPDQDFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMSEAT
DALIGLIKEHGRWVDPPVADE
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcgactggggtattgccagctccgttctccggggtcaagatctcggattcgaaactc
gggtttggtaaaagcttgaatattgtgaggatttgtgatttgaggagcttaagatctgct
aggagaagagtttcagtgatccggaattcgaatcaaggctctgatttagctgagcttcaa
cctgcttcagaaggaagccctctcttagtgccaagacagaagtattgcgagtcattgaat
aagacggtgagaaggaagactcgtactgtcatggttggagacgtcgcccttggcagcgaa
catcccataaggatccaaaccatgactacatccgatacaaaggatattactgcgactgtt
gacgaggtaatgagaattgcggataaaggagcggacattgtgaggatcactgttcaaggg
aagaaagaggcagacgcatgctttgaaatcaaagataaacttgttcagcttaattataac
ataccccttgtggcggacattcattttgctcctgctgtagccttgcgtgtagctgaatgc
tttgacaagatccgcgtcaaccccggaaactttgctgacagacgggcacagtttgagaca
atagagtacacagaagatgaataccagaaagaacttcagcatatcgagcaggtcttcact
cctttagttgagaaatgcaaaaagtatgggagagcaatgcgtatagggacaaaccacgga
agtctttctgaccgtatcatgagctactatggtgactctccacgtggaatggttgaatca
gcgtttgagtttgcacggatatgtcggaaactagactaccacaacttcgttttctcgatg
aaagctagcaacccggtgatcatggtccaggcctaccgtctacttgtggcggagatgtat
gttcatggatgggattatcctctgcatttgggagtcactgaggcaggtgaaggtgaagat
ggacggatgaagtctgctatcggaatcgggacgcttcttcaggatggacttggtgacaca
ataagagtttcgctgactgagccaccagaagaggagattgatccgtgtaagcgattggcc
aacctgggaacaaaagctgctgagcttcaacaaggcgttgcaccgtttgaagaaaagcat
aggcattactttgattttcagcgtaggactggtgatctacctgtacaaaaagagggagaa
gaggttgattacagaaacgtccttcaccgtgatggttctgttctgatgacggtttctctt
gatcaactaaaggcacctgaactcctctacagatcgcttgctacaaagcttgtcgttggc
atgccattcaaggatctggcaacggttgattccatcttacttagagagctaccacctgtg
gatgatcacgtggctcgtttggctcttaaacggttgatcgatgtaagtatgggagtcata
gcacctttatcagagcagctcacaaagccattgcccaatgcaatggttcttgttaacctc
aaggaactatctggtggtgcttacaagcttctccctgaaggtacacgcttggttgtctct
gtacgaggtgatgagccatacgaggagcttgaagtactcaagagcatcgatgctactatg
attctacatgatgtacccttcaatgaagacaatgttagcagagtacatgcagctcggaga
cttttcgagttcctatcagagaattcagttaacttccccgtcattcaccacattaacttc
ccaacagggattcacagggacgagttggtgatccacgcagggacatacgcaggagcactt
ctagtggatggacttggagacggtgtgatgctagaagcacctgatcaagacttcgagttc
cttaggaacacttctttcaacttgttacaaggctgcaggatgcgtaacaccaagacggaa
tacgtatcgtgcccttcttgtggaagaactctgttcgacttgcaagaaatcagcgctgag
atcagagaaaagacttcacatttgcctggcgtttcgattgcaataatgggatgcattgtg
aatggacctggagaaatggctgatgctgatttcggttatgtaggcggttctcccggaaaa
atcgacctttacgttggaaagacggtggtgaagcgtgggattgccatgtcggaggcaact
gatgctctgatcggtctgatcaaagaacatggtcgctgggtggacccaccggttgctgat
gagtag

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