Brassica napus (rape): 106371754
Help
Entry
106371754 CDS
T04128
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106371754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106371754
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106371754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DUF2020
Motif
Other DBs
NCBI-GeneID:
106371754
NCBI-ProteinID:
XP_048599056
LinkDB
All DBs
Position
A10:13714962..13719707
Genome browser
AA seq
1284 aa
AA seq
DB search
MKRRRFYDLKHPFDPFPFEIFSCGTWNPVEYIRIEHGKLTVPLLENGYILEDIRPFQRLR
LRSRKATLNDCTCFLRPGIDVCVLYPLHEDDLEPVWIDARIVSIERKPHESECTCEIYVR
IYIDQGCIGMEGQRINRDSVIIGLNQISILQKFYKEQSSDQFYRWKFSEDCTTLMKTRLS
LGNFLPDLSWLLVTSVMKNIVFHVRTVQTKMVYQIVTDEASSSSLSSMNITVEDGVSLSK
VVKFSPADIVDLEVNQETELYSEEDEVVELRRSKRRVMRPDRYTGCDYQIDTNDGWVRMM
PYRFEKLAVVSMEDEYYEEEEDSGHEDDDDTQNDLFKIKRSKSLQLKPKRRQGQIVMVEK
KRRRGLGVKQRKSLQVIPKRRQGQIVMIGKKRGRGLGRKEKKSGLTVIPFTPVFDPIPLE
QFGLNANSLDQGGGFSRNQYFDEIENYRSKSAKFGKKATEMEEMMESDLCWKGPNHVVKS
VQTRVTRSSSRSAAQKNKCSDEPKVYKKVTLSAGAYNKLIDAYMSNIDSTIASKNEPASV
VDQWEELKKTNFASKPHGWEMGGASGEDGEGETSENDMLWREMELCLASSYILDDNEVRV
DNEAFEKAKSGCEHEYMLDEEIGMCCRLCGHVGSEIKHVSAPFAKHKKWTIETKQIEEDD
IKTKLSHKESTSKDFTMSNESSEMLTAEESDNVWALIPHLKRKLHMHQRRAFEFLWRNLA
GSVEPPLMDPTSDNIGGCVISHAPGAGKTFLMIAFLTSYLKLFPGKRPLVLAPKTTLYTW
YKEFIKWEIPVPVHLIHGRRTYCVFKKNSVVNFNRVPKPSQDVMHVLDCLEKIQKWHAHP
SVLVMGYTSFLTLMREDSKFAHRKYMAKVLRESPGLLILDEGHNPRSTKSRLRKGLMKVG
TDLRVLLSGTLFQNNFCEYFNTLCLARPKFVHEVLMELDQKFKANQGVNKAPHLLENRAR
KFFLDNIAKKIDAGVGDERLQGLNMLRNMTTSFIDNYEGSGGGDALPGLQIYTLLMNSTD
IQHKILTKLGNVMASYHGFLLELELLVTLAAIHPWLVKTSACCAKFLNPQELLEIEKLKH
DAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFIELFESIFRWQRGREILTLTGDQ
ELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARA
FRPGQQKVVYVYQLLSRGTLEEDKYKRTTWKEWVSSMIFSEEFVEDPSLWQAEKIEDDVL
REIVGEDRVKSFHMIMKNEKASTG
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagacgtttctatgatttgaagcatccatttgatccattccctttcgagatc
ttctcctgtggtacatggaaccctgtggaatatataaggatcgaacatggaaagttgaca
gtacctctgttagagaacggttatatattggaagatatacgtcccttccaacgacttcgt
ctcagatcaagaaaggccactttgaacgactgcacatgtttcctccggcctggtatcgat
gtttgtgttctctatcctctccatgaagatgacttggaaccggtttggatcgacgcgagg
attgtttctatagagagaaagccacatgaatctgaatgcacttgcgagatctacgtaaga
atctacatagaccaaggctgcattggaatggaaggtcaaagaatcaacagagactcagta
atcatcggtctaaaccaaatctccatcctccaaaagttttacaaggaacaaagtagtgat
cagttctacaggtggaagttctctgaggactgcactacactgatgaaaacaagactctcg
ttaggaaacttcttgccggatctttcttggttgcttgttacttcggtaatgaaaaacatt
gtgttccacgtaaggacagtgcaaacaaagatggtttatcagattgtaacggatgaagcc
tctagcagctctttgagctctatgaatataacggtggaagacggtgtgtctttatccaaa
gtggttaagtttagtcctgcggatatagtagatcttgaagtgaaccaagaaacagaactc
tactcggaagaagatgaggttgtggaactgcgtcggtccaagagaagagttatgagaccg
gataggtataccggatgtgattatcagatagatacaaatgatggttgggtgcggatgatg
ccataccggtttgaaaagttggctgttgttagtatggaagatgagtactacgaagaagaa
gaagatagtggccatgaggatgatgatgatactcaaaatgatttgttcaagataaaaaga
tctaagtcacttcaattgaaaccaaaacgtagacaaggtcagattgttatggtagagaag
aagagaagacgtggacttggtgtaaaacaaaggaagtctctacaagtgataccaaaacgt
agacaaggtcagattgttatgataggtaagaagagaggacgtggacttggtcggaaagag
aagaagtctgggctgactgtgattcctttcactcctgtgtttgatcctataccgttggaa
cagtttggtcttaatgctaatagcttggaccaaggtggcggtttctcaagaaaccagtac
tttgatgagattgagaactaccgaagcaagtctgctaagtttggtaagaaagcaactgaa
atggaagagatgatggagtctgatctatgttggaagggtcctaaccacgtggtgaagtcg
gttcaaacacgagtaaccagatcatcatcgcggtcagctgctcaaaagaataagtgttct
gatgaaccaaaggtgtacaagaaagtaacactaagcgcaggtgcatataacaagctgata
gatgcatacatgagcaacatcgattcaacaattgcatccaagaacgagccggccagtgtt
gttgaccagtgggaggagttaaagaagacgaacttcgcttctaaaccgcatggatgggag
atgggaggagcctctggtgaggatggtgagggagagacttcagagaatgatatgttatgg
agagaaatggaactctgcttggcttcttcttacattcttgacgacaatgaggtaagagtg
gacaacgaggcttttgaaaaagctaaaagtggttgtgaacatgaatatatgctggatgaa
gagattgggatgtgttgtaggttatgtggtcatgtaggaagtgagatcaaacatgtttct
gcaccttttgctaaacataagaagtggactatagagactaagcagatagaagaagatgac
ataaagactaaactgagccacaaagaatccacaagcaaagacttcactatgtcaaatgaa
tcttctgagatgcttacagctgaagaaagtgacaacgtttgggcactaatacctcacctt
aagaggaaactacatatgcatcagcggcgagctttcgagtttctctggagaaacctagca
ggatctgtggagcctcctcttatggatcccacttctgacaacataggaggctgtgtgatc
tctcatgctccaggagctggcaaaactttcctgatgattgctttcctcacaagctaccta
aagctgtttcccgggaagagacctttggttcttgctccaaaaacaactctctacacttgg
tacaaggagttcatcaaatgggagatcccagttcctgttcatttgatccatggacgaaga
acctactgtgtattcaagaagaacagtgtagttaacttcaatagagttcctaaacctagc
caagatgttatgcatgttcttgactgcttagagaagatacagaaatggcacgcacaccct
agcgttcttgtaatgggttacacctcgtttctgactttgatgagggaagactccaagttt
gctcacaggaagtacatggctaaggtgctaagagagagtcctggccttcttattctcgat
gaaggacataaccctaggagcaccaagtcgagactacgcaaagggttgatgaaagttggt
actgacttgagagtacttctctcaggtactttgtttcaaaacaacttctgtgagtacttc
aacactttgtgtctagctagaccaaagtttgttcatgaagttctaatggagctggatcag
aagttcaaggctaatcaaggtgtgaataaagctcctcaccttcttgagaacagagctcgt
aagttctttcttgataacatcgccaagaagattgatgctggtgtgggagatgaacgtctt
caaggtctcaacatgcttaggaacatgactactagcttcattgataactatgaaggaagt
ggcggcggcgatgctcttcccggtttgcagatctatacgctgttgatgaactcaacggat
atacagcataagatcctcacaaagcttggaaacgtaatggcgtcttatcacgggttctta
ctagagctagagcttctggttacattggcagctatacatccttggttggtcaagacctca
gcctgttgcgccaagttcttgaaccctcaagaacttttagagatcgagaagctcaagcac
gacgcgaagaaaggatctaaagtcatgtttgtgcttaacttagtgttcagagtggtcaag
agggagaagatcttgatcttctgccacaacattgcaccaatccgtctgtttatagaactg
tttgagagcatttttaggtggcagagagggagagagatcttgaccttaacgggtgatcaa
gagctattcgagagaggtagagtgatagacaagtttgaagagcctggaaacccatcaaga
gtcttgttagcttcgatcacagcttgtgcagaagggattagcttaactgcggcttcgagg
gtgatcatgcttgactcggagtggaacccttcaaagacaaagcaagctatagctcgtgcg
ttcagaccgggacagcagaaagttgtgtacgtttatcagctcttgtctagaggaacgttg
gaggaagacaagtacaagaggacgacatggaaagaatgggtttcgagtatgatatttagt
gaggagtttgttgaggatccgtctctttggcaagcggagaagattgaagacgatgttctt
agagagatagtgggggaagatagagttaagtctttccatatgatcatgaagaatgagaag
gcttcaacagggtga
DBGET
integrated database retrieval system
