Brassica napus (rape): 106371901
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Entry
106371901 CDS
T04128
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106371901
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
106371901
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF1514
Motif
Other DBs
NCBI-GeneID:
106371901
NCBI-ProteinID:
XP_013667465
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Position
C7:2411558..2416381
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AA seq
606 aa
AA seq
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MHSTGKGISASRSTPNWLKTTALELDVFQSKKYYIDAELRDTACVSDIREALASAKSEDT
HKYTELVQILNTQNKSHVDVVAQQETLLKFLSRSVTFLDAAHHEELLIRILGMKIWDHPP
NVVYALLELIISLATTRGKYLNCCLEMLIFNLLSQPHILNKKMREVPSLVHSALHKISYL
VPPAPSQILYILVKRMPNIYNKGHGLVTYVDASLKLENSSIGKVVGDRILRVIMLRLLDL
DVEIERDDIPQDDSTLGLFDMELEVAVEETMNEGEECPVQSLNQNYSKVSELLDKLMVLS
FEHLESCQNAGRLDEVFEILFDLFENLILTTCKPKFPQFLLFYACSLDPEDCGVKFASKL
LAIFLSSNKDRVTRTNAVDYLASYLSRGKFLHASFVARILKRLVDECADYCRTYNVGASS
GHLVFYSGCQAIMYVLCFRMRSILDVPRFQLLLTPLESVLYHKLNPLKECNPYVVSEFLK
QAKAGGLFFVSEAFIFGDLPESETSRAFGGFFSFDPCLFKISNSFISPNFIYWSMVKRTH
DEDEAFAEVIVYGDTDNDEDYDDDPVLDNDVKRMSITPKQSYMRDTWRLSKMPSRIRPST
SPSQSL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcattctacaggaaagggaatctccgcatcgcgttcaaccccgaattggctcaagacc
accgcgctcgagctcgatgtttttcaatcgaagaaatattacatagatgctgagttaaga
gacacagcttgtgtgtctgacattagggaggcccttgcatcagccaaaagtgaggatacc
cataagtatactgagcttgttcaaatactgaacactcaaaacaaatctcatgtcgatgtt
gttgcacagcaagagacactcttgaaatttctatcacgctctgttactttcttagatgct
gctcaccatgaagagcttcttattcgtattcttggaatgaaaatttgggatcacccacct
aatgtagtatatgcattgctggagctaattatatcactggccactactaggggaaagtat
ctgaattgttgtttggagatgctcatatttaatttactctcgcaaccccacatactcaat
aagaagatgcgggaagttccttccttggtgcactctgctcttcacaagatttcttattta
gttcccccggctccctctcaaatactttacatactcgtcaagagaatgcctaacatatac
aacaaaggccatggtttagtgacatatgtggatgcctcgttgaagttggagaacagctca
atcggaaaggttgttggcgaccggatccttagggtgataatgctgaggttgctagatctt
gatgtggaaattgagcgggatgatattccccaagatgactccactttaggcttgtttgat
atggaacttgaagttgcagttgaagagaccatgaatgaaggagaggagtgtccagtgcag
tctctaaatcagaattattcaaaagtctccgagttgctggacaaattaatggtcctatct
tttgagcatcttgaatcctgtcaaaatgctggtcgtctggatgaggtgtttgaaattctt
ttcgacttgtttgagaacttaattctgacgacgtgcaaaccaaaatttccacagttcctg
ttgttctatgcgtgctcactagatcctgaagattgtggtgtgaaatttgccagtaagctg
ttggccatatttctctccagcaacaaagatcgagttactaggacgaatgcagtggattat
ctagccagctacttgtctcgtggaaagtttttgcatgcttcttttgtggctagaatttta
aaaagactggtggatgagtgtgcggattactgcagaacatacaatgttggtgcttcttct
ggccatctagttttctattctggatgtcaggcaatcatgtacgtgctatgcttccgaatg
agatcaatcctagatgttcctcgcttccagttgctgcttacaccgctggagtcggtttta
tatcacaaactaaacccgttgaaggagtgcaatccatatgtagtttctgagttccttaaa
caagccaaagctggtggtctgttctttgtctcggaagccttcattttcggtgacctacct
gagtctgagacctctcgtgcttttggtggcttcttctccttcgacccgtgcttgttcaaa
atctccaacagctttatctctccgaactttatatactggtcaatggtgaaaaggactcat
gacgaagatgaagcttttgcggaagtcatagtgtatggagatacagacaatgatgaggac
tacgatgatgaccccgttcttgataacgacgtgaagaggatgtctataactcctaagcag
tcttacatgcgggacacatggagactctcgaagatgccttcgagaatcagaccatcaaca
agtccaagccaatccctctga
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