KEGG   Brassica napus (rape): 106371980
Entry
106371980         CDS       T04128                                 
Name
(RefSeq) SART-1 family protein DOT2-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106371980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106371980
   04121 Ubiquitin system [BR:bna04121]
    106371980
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    106371980
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    106371980
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106371980
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 106371980
NCBI-ProteinID: XP_013667522
LinkDB
Position
A10:15062623..15067253
AA seq 810 aa
MEVEKSKSRHESREERGDNKGSPSRESRDGRRKEKDYRSKDKEKDYDREKNRDKDYRRDK
EKERDRKRDKEGDTEKEKSRDWDRERDRDRDRGKDKEREKERDKHRDREKEKLKEKSKEK
EKEAYKDKDRSRVKDRSSKKSYEDEDENEKPAETKDHYDSEDNADAAPSGKEQSATEVEE
RIKKMKEERKKKAEEASDALSWVARSRKIEEKRNAEKQRAHQMSRIFEEQDNLIQGENED
GEDGDHLSGVKVLHGLEKVAEGGAVILTLKDQSVLADGDVNNEIDMLENVEIGEQKRRNE
AYEAAKKKKGIYDDKFNDDPGAEKKMLPQYDEPDTDEGIILDAKGRFTGEAEKKLEELRK
RIQGQTTSTFEDLNSSAKVSSDYFSHEEMLRFKKPKKKKSLRKKDKLDISALEAEAIASG
LAAEDLGSRKDGKRQALIEEKERSENEKRSNAYQTAIAKADEASRLLRMEHVQSTKREED
ELADDAEDLYKSLERARKLALTKKEEVRSGPEALAHLLASRTNETTDDNSGSGAETQENT
MVFTEMNDFVWGLERGEGVVGKPESEDVFMDEDEAPKAPEEVKEEQPDGWAEVKDTDMDE
GEVPSDTKEITPDETIHEVAVGKGLSGVLKLLKDRGALKEKVEWGGRNMDKKKSKLVGIV
DDEGGKERFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQEELKL
KQMKNSDTPSLSVQRMREAQAQLKTPYIVLSGNVKPGQTSDPQSGFATVEKDVPGSLTPM
LGDRKVEHFLGIKRQSEAGNSNSPAKRPKH
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggaagtggagaagtctaaatccaggcatgaaagtagggaagagaggggtgataacaag
gggtctccttctagagaaagcagagatggaaggaggaaggagaaggattacaggagcaag
gataaagaaaaggactatgaccgcgagaagaacagggataaggactatcgaagggataag
gagaaagaaagggacagaaagagggataaagaaggagacactgagaaggaaaagagcaga
gattgggatagagagagggatagggacagagatcgggggaaagataaggagagggaaaag
gaaagagataaacatagagacagagagaaggagaagttgaaagagaagtctaaggagaag
gagaaggaagcgtataaagacaaggataggtcaagagttaaggatagatcgagtaagaaa
agctacgaggatgaggatgagaatgaaaaacctgcggaaacaaaagaccattatgacagt
gaggataatgctgatgctgcaccaagtgggaaagagcaatctgcaacggaagttgaggag
cgcattaagaagatgaaagaagaaagaaagaagaaagctgaagaagcttctgatgctcta
tcatgggttgcaaggagccgtaaaatcgaggaaaaaagaaatgctgagaagcaaagagct
catcagatgtccagaatttttgaggagcaggacaatctgattcaaggtgaaaatgaagac
ggcgaggatggtgatcatctatctggtgttaaagttctacatggtttggagaaggtggcg
gaaggtggagcagttattttgacactaaaagaccagagtgtccttgccgatggagatgtc
aacaatgagattgacatgctggaaaatgtggaaattggagaacagaagcgtcgaaacgaa
gcttatgaagcagccaagaagaaaaagggaatatatgatgataagtttaacgatgatcct
ggggcagaaaagaagatgcttccgcagtatgatgagcccgatactgatgaggggataatc
ttggatgcaaagggtcgctttactggtgaagcagagaagaagctggaagagcttcgtaaa
agaatccagggtcaaacgacaagtacttttgaagacctcaactcgtcagcaaaggtctca
tcagattacttctcacatgaagaaatgctacgttttaaaaaaccaaagaaaaagaaatca
ttgcggaaaaaggataaattggacataagtgcgcttgaagcagaagctattgcatcagga
ctggcagctgaggatcttggttctcgcaaagacggcaaaaggcaggccttgatagaagag
aaagaaagatccgagaacgaaaaacggagcaacgcctatcagaccgccattgctaaagct
gatgaggcatccagattactcagaatggaacacgttcagtctactaaaagagaagaagat
gagttggctgacgatgctgaagatctttataaatcgttggagagagctcggaagttagct
ctcacaaagaaagaggaagttagatctggtcctgaagcacttgcacatcttctggcttcc
agaaccaatgaaacgaccgatgataatagcggctctggagctgagacacaagaaaataca
atggttttcacagagatgaatgattttgtctggggtctcgagcgtggtgaaggtgttgtg
gggaagcctgagagcgaagatgttttcatggatgaagatgaagcacccaaagctcctgaa
gaagtaaaagaagagcaaccggatggttgggcagaagttaaagacactgatatggatgaa
ggagaggttccatcagataccaaagagataactcctgatgaaaccatacacgaggttgcg
gttgggaaaggattatctggtgtattgaagcttcttaaagacagaggagccctaaaggag
aaggtcgaatggggtggtaggaacatggacaaaaagaagagcaagcttgttggtatcgtg
gatgatgaaggaggtaaagagagattcaaggatatccggattgagaggactgacgagttt
ggtagaactttgactccgaaagaagcatttcgactactctctcacaaattccacgggaag
ggacctggaaaaatgaaggaagagaaacggatgaaacagtaccaggaagagctcaagcta
aagcaaatgaaaaactcagatacaccatcgctctctgttcagagaatgagagaagcgcaa
gctcaattgaaaactccttacattgtcctcagtggcaatgtcaaaccaggacaaactagt
gatcctcagagcgggtttgcgactgttgagaaggatgttccaggaagcttaacaccaatg
cttggtgacagaaaggtggagcatttcttgggaataaaacggcaatcagaggctggaaac
tcgaattcaccagcgaagagaccgaagcattga

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