KEGG   Brassica napus (rape): 106371983
Entry
106371983         CDS       T04128                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
bna  Brassica napus (rape)
Pathway
bna03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106371983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bna03009]
    106371983
Ribosome biogenesis [BR:bna03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106371983
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Utp13 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_Nup120_160 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_HPS5 PROPPIN WD40_like Beta-prop_Vps41 KNTC1_N Ge1_WD40 Beta-prop_RIG_1st Nbas_N Beta-prop_NOL10_N Cytochrom_D1
Other DBs
NCBI-GeneID: 106371983
NCBI-ProteinID: XP_013667559
LinkDB
Position
A10:15075065..15079956
AA seq 868 aa
MAPQSLKKNYKCSRSLKQFYSGGPFIVSSDGSFIACACGEAINIVDALDSSVKSTIEGES
DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRTWKGHEGPVMGMAVHASGGLLATA
GSDRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDADKNILISGSDDATVRVWDLLAKNT
EKKCLAILDKHFSAVTSIALSEDGWTLLTAGRDKVVNVWDLHDYSCKTTVATYEVLEAVT
PVSSGTPFASFVASLDKKGKKKKTPSQETHFITLGERGVVRIWKSEGSVCLYEQKSSDIT
VSSDDEESKRGFTAAAMLPSDRGLLCVTADQQFFIYSVVENAEESELVLSKRLVGYNEEI
SDMKFLGDEEQFLAVATNLEEVRVYDVETMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVT
GSKDKTVRLWNATSQSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISE
DSEDPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK
RRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSC
GADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMVATGGGDAVINLWHDSTASDKE
DEFRKEEETILRGQELENAVLDAEYTKAIRLAFELRRPHKVYELFAGLCKKRESDDQIVK
ALQGLEKEEFRLLFEYLREWNTKPNRCHIAQFVLYQTFNILPPTEIVQVKGIGELLEGLI
PYSQRHFNRMDRFVRSSFLLDYTLGEMSVIDPETETEYRKDKKMEEVKVIASVSAMEQDS
EGVDQKTPSRKRKSQKSKDKSNKKRLVA
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggctcctcagtcgttgaagaagaactacaagtgctctcgttctctaaagcagttctac
agcggcggtcctttcatcgtttcgtctgacggttcttttatcgcctgcgcttgtggtgag
gccattaacatcgtcgacgcgttggactcgtcggtgaaatcaacgatcgaaggagagtcg
gatacgctcactgctctggctcttagtcctgatgataagctgctattctccgctgggcat
agtaggcagattcgagtttgggatttggaaacgttgaaatgcattcgcacttggaaggga
cacgaggggcctgtgatgggaatggctgtccacgcgtctggtggattgttagctacggct
ggatctgataggaaagtgcttgtttgggatgttgatggaggtttctgcactcattatttc
aaaggtcataaaggagttgtttcaagtatcttgttccatcctgatgctgacaaaaacatt
cttatatcgggaagtgatgatgctaccgttcgtgtctgggatcttttggcgaagaatact
gagaagaaatgtcttgccattttggataagcacttttcagctgtgacttccattgctctg
tcagaggatggatggactttactcactgctggaagagataaagttgtgaatgtgtgggac
cttcatgattatagctgcaagactacagttgcaacttatgaggtactagaagctgtgaca
ccagtttcttctgggactcctttcgcttcatttgtagcttctcttgataagaagggtaag
aagaagaaaactccttctcaagaaacgcattttattactctcggggaacgtggtgtagtg
cgcatttggaagtctgaaggttcagtttgcctctacgagcagaagtcgtcggatatcact
gtcagttcggatgatgaggaatctaaaagagggttcactgcagctgctatgttgccttct
gatcgtggactgctttgtgtgactgctgatcagcagttttttatctactccgttgtggaa
aatgcagaagaatcagaattagtgctaagcaagaggcttgttggatataacgaagaaata
tctgatatgaagttcctaggtgatgaagaacagttcctcgcagtagctacaaatctcgag
gaggttcgtgtttatgatgtagaaacaatgtcatgttcgtacgttttagctggccataaa
gaagttgttctgtcccttgacacatgcgtatctagttctgggaatgttctaatcgtgact
ggaagtaaagacaaaactgtaaggctatggaatgcaaccagccaatcttgcattggagtt
ggtacaggtcataacggagatatcttagcggttgcttttgcgaagaaatctttcagtttc
tttgtcagtggcagtggtgatcgtacactgaaggtctggagccttgatggcatctcagag
gactccgaagatcccattaatctgaaaactagaagtgttgttgctgcccacgataaagac
atcaattccgtggctgttgctcgtaatgatagcttggtttgcactggctctgaggatcgg
acagctagcatatggaggctaccagacttggtgcatgtcgttacgcttaaaggacataag
aggcggattttttctgttgagttctcgcctgttgatcaatgcgtaatgacagcatcaggt
gataaaacagtaaaaatttgggctatatctgacggttcatgcctcaaaacattcgaaggt
catacctcaagtgtccttagggcctcattcataactgacggcacccaatttgtctcatgt
ggtgccgatggtttattgaaactttggaatgtgaacactagtgaatgcattgccacatat
gaccagcacgaggacaaggtgtgggctttagctgttggaaagaaaacagaaatggttgct
actggtggaggggatgcagttattaatttatggcatgattccaccgcttctgataaagaa
gacgaattccggaaagaggaagaaacaatcttgagaggtcaggagctggaaaacgcggta
ttagatgccgaatacactaaagccataagattagcatttgagcttcgtaggcctcacaaa
gtttacgaactctttgctggcctctgcaagaaaagagaatcagatgaccagatagtgaaa
gctcttcaaggacttgaaaaagaagagttccgtctactttttgaatatctcagagaatgg
aacacaaaaccaaaccgatgccacattgctcagtttgttctttaccaaaccttcaacata
cttcctcccacagaaatcgttcaggtaaaaggaattggagaactcctggaaggtttaatc
ccatattctcagagacatttcaataggatggacagatttgtaagaagcagtttcttgtta
gactacacactcggtgagatgtctgtgattgatccagagactgagactgagtatcgcaag
gacaagaagatggaagaagtaaaggtcatcgcttctgtgtctgcaatggaacaagactcg
gaaggagtagaccagaagacaccttcgaggaaacgaaagtctcagaaatcaaaagataaa
tcgaacaagaagagactcgttgcataa

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