Brassica napus (rape): 106372009
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Entry
106372009 CDS
T04128
Name
(RefSeq) conserved oligomeric Golgi complex subunit 1
KO
K20288
conserved oligomeric Golgi complex subunit 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106372009
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
106372009
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Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
KxDL
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
106372009
NCBI-ProteinID:
XP_013667589
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Position
A10:complement(15226797..15231178)
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AA seq
1066 aa
AA seq
DB search
MRMSSASAAEHRPSAATLGGGQRDAESLFRAKPMSEIRNVESATRKNIEDKKEELRQLVG
TRYRDLIDSADSIVHMKSLCESISANISSIHGNIRSLSSSSSVAEAPTIANPNSVRVNVY
GIACRVKYLVDTPENIWGCLDESMFLEAAGRYMRAQHVQQRLVKLEGCGGGEVDQSKLLE
KFPLLEHQWQIVESFKAQISQRSHERLLDQGLGLGAYVDALTAVAVVDELDPKGVLGLFL
DSRRTWVLQKLNACSGDDAGNVVSVFCDVLSVIEVTVGQVGELFLQALTDMPLFYKTILS
TPPASQLFGGIPNPEEEVALWKSFRDNLESVMVIFDKADISKACLSWLRECGGQIVGKVN
GKHLIEAIVTGGELGTAEKLIRETMDSKDVLSGSLDWLKGVFGSEVELPWNRIREIVLED
DLNLWDEIFEKAFVERMKSIIDSRFDDLAKAVNVAESVRAFSEITGEKINFQAYLNRPST
GGGVWFIEPNAKKLGLIAGNKTSPEESDFQSCLTAYFGPEVSQMRDAVDQRCQNVLEDLL
SFFESEKAGQRLKDLAPYVQNRCYDSVSALLSDVDKELEFLFSAIKKENNDSEAISPAIV
IEKSLFMGRLLFALLNHSEHVPLILGSPRLWCRETMTAVSDKLSSLLRQPRYGSNTALTA
DSPGKQVHTDLRKQSSLAVAALLKAEEKTSPKFEELNKTMRDLCIKAHTLWIQWLSDELS
AILLRDLRSDDGLSATTPLRGWEETIVKEEQGESPSELKISLPSLPSLYIISFLCRASEE
IHRIGGHVLDKSILQKFASSLLEKIIIIYEDFVSPREANEPQISEKGVLQILLDLRFASD
VLSGGDTSTNVEIPKSTVNRSAFRRKQGQQQRKSVSRGRIDGVISQLSQKLDPIDWLTYE
PYLWENEKQSYLRHAVLFGFFVQLNRMYTDTAQKLPTNSESNIMPCSTVPRFKYLPISAP
ALSSRSTNKVSIPVTSNEGSSRNSWNSFTNGEHSQTSDLDDDSSFGVASPFLKSFMQAGS
RFGSILSDGQVGIFKDRSAAAMSTFGDIIPAQAAGLLSSFTTTRYE
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtcatcagcttccgccgcggagcaccggccttccgccgcgactctcggcggc
ggtcaaagagacgcggagtctctgtttcgcgcgaaaccgatgtctgagatccggaacgtg
gagtcggcgactaggaagaacatcgaggataagaaggaggagctccggcaactcgtcggg
actcggtaccgcgatctgatcgactcagctgactcgatcgtccacatgaagtcgctttgc
gagtcgatctcggcgaatatctcttcgatccacgggaacattagatcgctttcttcgtcc
tcttccgttgcggaagctcccacgattgcgaaccctaactcggtccgagtcaatgtgtac
gggatcgcttgtcgggtcaagtatctggtggacacgccggagaatatatggggatgccta
gacgagtcgatgtttctagaagctgcggggaggtacatgcgtgctcagcacgtgcagcag
aggctggttaagttggagggatgtggcggtggtgaggttgatcagagtaagctgttggag
aagtttccgctgctggagcatcagtggcagattgttgagagtttcaaggctcagatctct
cagaggagccatgagcggcttttggatcagggtttagggttgggggcctacgtggacgcg
ttgactgctgttgctgtggttgatgagcttgatccaaagggagtgcttgggttgtttctc
gactcgaggaggacttgggttctgcaaaagttgaatgcttgtagtggtgatgatgccggg
aatgtagtttcagtgttttgtgatgttttgagtgtgattgaggttactgtaggacaagtt
ggtgagctctttttgcaggcattgactgatatgcctctgttttataagactatcttgagt
acccctccagcttctcagctgtttggtgggattcctaatccggaagaggaggttgcgttg
tggaaatcgtttagggataatttggaatccgtcatggttatttttgataaagctgacatt
tctaaagcttgcctgagttggttgagggaatgtggtgggcagattgttggtaaggttaat
gggaagcatttgattgaagctattgttactggtggagagcttgggacagcggagaagttg
ataagagagaccatggatagcaaagatgtcttgagtggtagtttagattggcttaagggt
gtttttgggtctgaggtagagctgccttggaatagaatccgggagattgttctggaagat
gatttgaacctgtgggatgaaatatttgagaaggcgtttgtggaaagaatgaaatccatt
attgactccagatttgacgatttggctaaagctgtcaatgtggcagaatcggttcgtgct
tttagcgagatcactggtgagaagatcaacttccaagcatacttaaacagaccatctaca
ggtggtggtgtctggttcattgagcctaacgcaaagaaacttggtcttatcgccggaaat
aaaacatcacctgaagaaagtgatttccaaagttgtctaactgcttactttggtcctgaa
gttagccaaatgagagatgctgttgatcagcgctgccagaatgttttggaagacctccta
agcttctttgagtcagaaaaggcaggtcagaggttaaaggatctggctccatacgtgcag
aacaggtgttatgacagcgtctcagcacttctttcagatgtagataaagaactcgagttt
ctcttttctgccataaagaaagagaacaatgacagtgaagcaatttcacctgctatagta
attgagaaatctctttttatgggacgccttttgtttgcattgctgaaccactctgaacac
gttcccttgattctcggttctccaagattgtggtgtagagaaactatgactgcagtttct
gataagttgtcatccttgttgaggcaaccaagatatggctcgaatacggcactcactgct
gacagccctggaaagcaggtgcataccgatcttaggaagcagagttcgttagctgttgcc
gcactactcaaggcagaagagaagacaagtccgaaatttgaagagcttaacaaaactatg
cgagatctgtgcattaaagctcataccttgtggatccagtggctatcggatgagctttca
gctattctcttgcgtgatctgaggagtgatgatggattatctgctacaactcctttaagg
ggttgggaagagacaatagtaaaggaagagcagggcgagagtccatctgagttgaagata
tcacttccgtccttgccgtcgctctatattatctcttttctgtgtcgggcatcagaagaa
attcatcgaattggaggccacgtactggataaatcaattttgcaaaaatttgcttcaagc
ttgttggagaagatcatcattatttatgaggatttcgtatctccgagggaggccaacgaa
cctcaaatttcagagaaaggagtcttacaaattttgctggatctgagatttgcatcggac
gttctttctgggggtgatacaagcaccaatgtggagataccaaagagtacagtgaacaga
tcagctttcagacgaaagcaaggccaacagcaaagaaagtcagtcagtagaggtcgcatt
gatggagtgatctcccaactgtcccaaaagttggatcccatagactggctcacgtatgag
ccttatctctgggagaacgaaaagcagtcatacctacgccacgctgtactctttggattc
tttgtgcaactaaaccgaatgtacacagatactgcgcagaagctaccaactaattcagag
tcaaatatcatgccatgctccacagttccccgcttcaaataccttcccataagcgctccg
gctctgtcctctagaagtacaaacaaagtctcgatcccagttacatcaaatgaaggttcg
tcaagaaactcatggaattcatttacaaatggtgagcattctcaaacgagtgatttagac
gatgactctagttttggtgtggcttccccgttcttaaagtccttcatgcaggctggtagt
agatttggatcaatactaagtgacggacaagtgggaatattcaaggatagatcagcagcc
gctatgtcgacatttggagatataataccggctcaagcagccggtttactctcttctttc
acaaccaccaggtatgagtga
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