Brassica napus (rape): 106372105
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Entry
106372105 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI5
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106372105
03083 Polycomb repressive complex
106372105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106372105
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106372105
Histone modification proteins
HAT complexes
HATB complex
106372105
HDAC complexes
Sin3A-HDAC complex
106372105
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106372105
PRC2.2
106372105
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106372105
Heterochromatin formation proteins
Other heterochromatin formation proteins
106372105
Chromatin remodeling factors
NuRD complex
106372105
NuRF complex
106372105
NuRF complex (fruit fly)
106372105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
106372105
NCBI-ProteinID:
XP_013667694
UniProt:
A0A078I374
LinkDB
All DBs
Position
A1:3917608..3921048
Genome browser
AA seq
476 aa
AA seq
DB search
MESEVAAKARREAETPATYIGLKTRGQRAKLNNGSVSASSQQQRSTEKKKRKSHKPIVDK
KYSQWKTLVPILYDSLSNQSLVWPCLSCRWGPQIEQALAKNQQRLYLTEQTNGSVPNTLV
VATCEAVKKQLNGKACSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDTE
TQPDRHAVLGAPHSRPDLILTGHQDNAEFALAMFPTEPFVLSGGKDKSVVLWSIQDHITT
AGSNKTGGRSVGPRGVYHGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWDARTGSGPAMK
VEKAHDADLHCVDWNPHDNNLILTGSADNTVRLFDRRNLTSNGVGSPIYKFEGHNASVLS
VQWSPDKSSVFGSSAEDGLLNIWDYDKLGKKSARAPKSPPGLFFQHAGHRDNVVDFHWNV
LEPWTIVSVSGNCESNGGGGTLQIWRMSGLIYRPEDEVLAELENFKSQVFSCASRP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgaagtagcagcgaaggcgagaagggaagcagagactccggcgacgtacatt
ggactgaagacgagaggtcagagagctaaacttaacaacgggtctgtgtcagcatcttcc
cagcagcagagaagcaccgagaagaagaagaggaagagtcacaaacccatcgttgacaag
aagtactctcagtggaagactcttgttcccattctctatgactcactctccaaccagagc
ctcgtctggccttgtctctcttgcagatggggaccacagattgagcaagcattggctaag
aatcagcagcgtctctacctcacggaacaaactaatggaagtgtgcctaataccttggtc
gtagctacttgcgaagctgttaagaagcagcttaatggaaaagcatgctctccatttgtg
aagaagtacaagacaatcatccaccctggagaggtcaacagaatcagggaactgccacaa
aatagtaagattgtagctactcacaccgacagtcctgatgttctcatttgggacactgag
actcaaccagatcggcatgctgtgcttggagctccacattctcgtcctgatttgatacta
actggacaccaggataatgctgaatttgctcttgcgatgttcccaaccgaaccttttgtt
ctttctggaggcaaggacaagtcagttgttctgtggagtatccaagatcatatcacaaca
gctggtagtaataaaactggtggtcgttccgttggccctcgaggtgtatatcatggccac
gaggatacggttgaagatgtggccttctgtccatctagtgcccaggagttctgcagtgtt
ggtgatgactcttgtcttatactatgggatgcacgaaccggctccggtcctgccatgaag
gttgagaaagcacatgatgctgatcttcactgtgtcgattggaatcctcatgacaacaat
ctgatcctgactgggtcagcagataacactgtccgtctgttcgaccgccgaaacctgacc
tcaaatggagttggctctcctatctacaaatttgaaggccacaatgcttctgttctttct
gttcagtggtctcctgataagtcatctgtttttgggagttctgcagaagatggtctctta
aacatatgggattatgataagctcggcaagaagtctgcgcgtgcacccaaaagccctcct
gggcttttcttccagcatgctggtcacagggacaacgtggtcgacttccactggaacgta
ttggaaccttggactatcgtcagtgtttctggtaactgtgagagtaacggtgggggtggt
acattgcagatatggcggatgagtgggttgatttacagaccggaagatgaagtactggca
gagctagagaacttcaagtcacaggttttctcatgtgcctccaggccttga
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