Brassica napus (rape): 106372154
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Entry
106372154 CDS
T04128
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106372154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106372154
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106372154
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Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
Ion_trans_2
DUF3382
Motif
Other DBs
NCBI-GeneID:
106372154
NCBI-ProteinID:
XP_048598249
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Position
A10:15543098..15546375
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AA seq
759 aa
AA seq
DB search
MRITHSYLPWPIQSPLSTSLSNLHLQIFCLSHGGSSISIMPSHTNFLFRWIGLFSQKLRR
ETAGISENNGGESSSSSDDTPVLSSGECYACTQVGVPAFHSTSCDQANAPEWRASAGSSL
VPIQEGSAPTNPVRPRLRRLKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYAL
SIGRTTGPACLYMDGAFAAVVTVVRTCLDALHLWHVWLQFRLAYVSRESLVVGCGKLVWD
PRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLP
KIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQ
CMRTANCNLSLSCQEEVCYQFVSPTSTIGFPCLSGNLTSVVKKPMCLDSDGPFRYGIYGW
ALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVVFSIVMVLSGLLLFTLLIG
NIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWTALGGEDELELI
QDLPPGLRRDIKRYLCVDLINNVPLFRGMDDLILDNICDRAKPRVYSKDEKIIREGDPVQ
RMIFIMRGRVKRNQSLSKGVVATSTLEPGGYLGDELLSWCLRRPFIDRLPPSSATFVCLD
NIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMSWRRYRKRTCG
GVGGSMSPVSEHSVEGNSERRLLQYAAMFMSIRPHDHLE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcacacactcttaccttccttggcctatacaatctcctctttctacctctctc
tccaatctccacctgcaaatcttctgtctctcccatggtggttcctctatttcaatcatg
ccctctcacaccaacttcctcttcaggtggattggactgttttctcagaaactccgccgg
gaaacagctggaatctcggaaaacaacggtggagaatcgagcagcagtagcgacgacacg
ccggtgctgagctccggcgagtgttacgcatgcactcaagtaggcgtaccggccttccac
tccacaagctgcgatcaagccaacgcgccggagtggcgtgcctcagccgggtcctcacta
gtcccgatccaggaaggatccgcacccaccaacccggttcgaccccggctcagacgtctc
aagggcccgttcggagaagttctcgatcccaggagcaagcgcgtgcagaggtggaaccgc
gcgttgcttctagctcgcgggatggccttggcggtggatccgctcttcttctacgcgctc
tccatcgggagaactactggacccgcgtgtctctacatggacggcgcgttcgctgctgtt
gtaacggtcgttcgcacgtgcctggatgctcttcatctgtggcacgtgtggcttcagttt
aggctggcttacgtctcgagagagtcactcgtggttgggtgtgggaaactcgtttgggat
ccacgcgccatcgcgtctcactatgcacgctcgcttactggcttctggtttgatgttata
gtcatcctcccggttccgcaggctgtgttttggttagtggtgccaaaactgataagagaa
gagaaggttaagctgataatgacgatccttctgctgatcttcttgttccagttcctcccc
aagatttatcactgcatctgcttgatgagaaggatgcagaaggtcactggttacattttc
gggactatttggtggggttttgctcttaacctcatcgcttatttcatcgcttctcatgta
gctgggggatgctggtatgttcttgcaatacagcgtgtcgcttcttgtatcagacagcag
tgcatgaggactgcgaactgtaacctgagtctgtcttgccaagaagaggtctgttaccaa
ttcgtgtcacccactagcacaattgggtttccatgcttatctggaaacctcaccagtgtg
gttaagaagcctatgtgcttagactctgacggaccattccgatatggtatctacggttgg
gcacttccggtcatctccagcaactctcttgcggttaagatactttaccctatcttctgg
gggctaatgactctcagcacattcgggaacgatcttgagcccacaagcaactggcttgag
gtggttttcagcatagttatggtccttagcgggttattactcttcactctgttgatcgga
aacattcaggtgtttttgcacgcggtgatggcaaagaagaggaaaatgcagatacggtgt
agggatatggaatggtggatgaaacgtaggcagttgccttctcggttaagacagagagtt
aggagatttgagcggcagagatggactgccttgggtggagaagacgagctggaacttata
caagatctgcctccgggtcttcggagagatattaagagatatctttgcgttgatctcatt
aacaatgttccattgttcaggggcatggacgatttgatcctagacaacatttgcgatcgt
gctaagcctcgtgtctactctaaagacgaaaagattatccgagaaggagatcctgtacag
agaatgatattcatcatgcgtgggagagtgaaacgtaaccagagcctaagcaaaggcgtt
gtagccactagtacgctcgaaccaggcggctacttaggcgacgagctactctcgtggtgc
ctacgtcgtccatttatcgaccgtcttcctccttcctccgcaacatttgtctgtctagac
aacatcgaagcgttttccctgggatcagaagatcttaggtacataaccgatcatttccgc
tataaattcgcaaacgagcgccttaagaggactgcaagatactactcctcaaactggagg
acgtgggctgcggtgaatatacaaatgtcgtggcgccggtacaggaagagaacatgtggt
ggtgtaggcggttcgatgagtcctgtgtcggaacatagcgttgaaggtaacagtgaacgc
cgtttgcttcagtatgcagcaatgttcatgtccatccgaccgcatgatcatctcgagtaa
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