Brassica napus (rape): 106372208
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Entry
106372208 CDS
T04128
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106372208
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106372208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
106372208
NCBI-ProteinID:
XP_048625082
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All DBs
Position
C9:complement(57281360..57287838)
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AA seq
1017 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL
LGVVRIYSKKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDTMDGVVFSTSQFGLDERFGDGDTAQTALELDEEV
FQDKDLLGSDDEAVQGNDHNAYPDAATPEIKDEMVEVSDAMPRDFNQEQVEDLVVGDEFM
EDAQAPQTPGLVEVPNLSSVRDQLACDDHMEVEDPNAEEVRKASGEPDANEPSEYPAGES
AVAPMEVDKSLINETIDAQNEPQEERTEHVHVTSPCVSHITNEMENPGQVITESGTNVIT
DKSDAVPSVESPGEPTMSNAEHCLTQEPKDPGEENQDHFAITTEVNQETDSSLQVDEQLN
NARATDEGLGDLTGSADTDLPAPEKVLAAPNGLGDENGCMVELESTPDKEDTGTCNGDAG
NNNITGKKRTFTESTLTAESLNSVESVGLIQSKRTANSVPDDDDLLSSILVGKSSFLKMR
STPVLEVATTKRLKSAPRSTTTKRKVLMDDPMVLHGDLIREQLTNTEGIRRVRKKAPCTI
PEILMLQRQALEEDGLFKEPIFTGMSVELVSLHNEPYDLRGITVIKEDDGHASVEVVEGN
ECSVRAVEEKDAEERSAPQTHPNDSEEQPAEAHTQPQDQQIVDQDEEGKKDNELGENICD
LEALNESNVAGDEANHVVNEEISEMPSEDKIDRVEDLQVEGYLENHDGGLGGQDVCDVVI
EIAEGDVDNNTTLNETDLKVEDEDKKTDDASAEVIETGIDDQTPCDNTIVEEAGGSSNLA
SEKNCKEPLVEENNDGVIPEIESDRYNEIFTEEAYMQSAPDGEPTYGLMRDNDEMDIMEV
AHDTGFLNMDDDEVDEDHEDDGVEEGDEARLLENSGWSSRTRAVAKYLQTIFDKEAENGK
NVIVADKLLAGKTRKEASRMFFETLVLKTRDYVQVEQAKPYESIIIKPRPKLTKSIF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattagcaaagaaaggaccacttgggacgatatggatcgcg
gcccatttggagaggaagcttcgtaagaatcaggtcgctgatactgacattggagtctcc
gttgattctattctctttccggaagctccaattgctctgcgactgtctagtcatctcctc
cttggtgtggttcgtatttattccaaaaaggtcaattacctctttgatgattgcagcgag
gcactgcttaaggttaagcaagcttttcgctctgctgcggttgacctaccccctgaagaa
tccacagcgccgtaccactctattacgttgcctgagacatttgatcttgatgattttgag
ctccctgacaacgagatctttcagggtaattacgttgaccatcatgttagtacaagagag
cagatcacccttcaggataccatggacggtgttgtattctcaacatctcaatttgggtta
gacgaacgatttggtgatggcgacactgctcaaaccgctttggagctcgacgaggaagta
ttccaggataaggatcttcttggatccgatgatgaggcagttcaaggcaatgatcacaat
gcatatccggatgcggctacaccagagataaaggacgaaatggtagaagtttctgatgca
atgcccagagatttcaatcaagagcaggttgaagatcttgtagtgggtgatgagttcatg
gaagatgctcaagctcctcaaacccctggactagttgaggtgccaaacttgtctagtgtc
agagatcagctggcatgcgatgatcacatggaggtagaggatccgaacgcagaagaagtt
aggaaggcctctggagagccggatgctaatgagccctctgaatatcctgccggagaatca
gcagttgctcccatggaggtggataagtcgttgataaatgaaactatcgacgcacaaaac
gagccacaggaggagaggacagagcatgtgcatgttacatcgccatgtgtttctcacatc
accaatgaaatggagaatcctggtcaagtaatcactgagtcaggaaccaatgtcataaca
gataagtcagatgctgttccttcagttgagtcccctggagagcctacgatgagtaatgct
gagcattgtttaactcaagaaccaaaagatcctggagaagagaaccaagatcattttgcc
attaccactgaggtcaatcaggaaacagattctagtttacaagtagatgagcagctgaac
aacgcacgggcaactgatgaagggttgggagatctgactggatcggctgatactgatttg
cctgcacctgagaaggtattagctgcacctaacggtctgggggacgaaaatggttgtatg
gttgaacttgaatcaacaccagataaagaagacactggcacatgtaacggggacgcagga
aataataacattactgggaagaaacgcacttttacagaaagcacactaactgcagagagt
ttgaactctgttgagtcagttggattgattcagtccaagagaactgcaaattctgttcct
gatgacgacgacttgttgtcttctatcttagttggaaagtcatcttttctgaagatgagg
tctacacctgtgcttgaagtagcaactacaaaacggttaaagtctgctcctcgttctact
accacaaagaggaaggttctaatggatgaccctatggtcttgcatggcgaccttatacgg
gaacagctgacaaacacggaaggtatacgccgtgtgcgtaagaaggcaccttgcaccatc
cctgaaatcttgatgcttcaaagacaggctttggaggaggatgggctttttaaggagcca
atattcactggtatgtcagtggaattagtatctctgcacaatgagccgtatgatctaaga
ggaatcacagtaatcaaggaggatgacggccatgcttctgttgaagtggtggaaggtaat
gaatgctcagttagggctgtggaagaaaaagacgctgaggaaaggtctgctcctcaaaca
cacccaaatgattctgaggagcaacctgctgaggctcatactcagccacaagaccaacaa
attgtagaccaagatgaagaaggaaaaaaagataacgagcttggtgagaatatatgtgac
ttggaagctttaaatgaaagcaatgtagctggtgacgaagcaaatcatgtagtgaatgaa
gagatcagtgaaatgccatctgaagacaaaatcgatcgtgtagaggatttacaggtggaa
ggataccttgaaaaccatgatggaggcctaggcggtcaagatgtttgtgatgttgttata
gaaattgctgaaggcgatgtagataacaacaccactctcaatgagacagacttgaaagtt
gaagatgaagataagaagacggatgatgcctcggctgaagttattgagactgggatagac
gaccagactccatgcgataacacaattgttgaagaagctggtggttctagtaatctagct
tcggaaaaaaattgcaaggaacctcttgtggaagaaaataatgatggagtgattcctgag
atagagtctgatagatacaatgagatttttactgaggaggcttatatgcaaagtgcacca
gatggggaacctacttatggtcttatgagagataatgatgaaatggatatcatggaagtt
gcacatgacacaggatttttgaacatggatgatgatgaagtagatgaagatcacgaggac
gatggtgtggaagagggtgatgaagctcgtcttctagagaacagtggatggtcttctcgt
accagggctgtggcgaagtatcttcagacgatatttgataaagaagccgagaatgggaag
aatgttattgtagcagacaaacttttagctgggaagacccgtaaagaagcatcaagaatg
tttttcgaaacactggttttgaaaacaagggattacgtccaagttgagcaagctaagcca
tatgaaagcatcatcataaaaccgcgaccaaaactcaccaaatccatcttctaa
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