KEGG   Brassica napus (rape): 106372276
Entry
106372276         CDS       T04128                                 
Name
(RefSeq) elongator complex protein 1 isoform X1
  KO
K11373  elongator complex protein 1
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106372276
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    106372276
SSDB
Motif
Pfam: Beta-prop_ELP1_1st Beta-prop_ELP1_2nd A-sol_ELP1 TPR_ELP1 HB_ELP1 ANAPC4_WD40 TPR_GEMI5
Other DBs
NCBI-GeneID: 106372276
NCBI-ProteinID: XP_013667907
UniProt: A0A078FCP2
LinkDB
Position
C9:58932643..58937445
AA seq 1318 aa
MKNLKLFSEVSQNIQLHSTGDEAVRFAAYDIDQSRLFFASSTNFVYALHLSSFQNGRDCA
KGLPVEVCSIDLEAGDFITAFDYLAEKESLLIGTSRGLLLVHEVESNVTELVGNIEGGVK
CLSPSPTGDLLGLISGFGQLLVMTYDWDLMYERALSEVTEGGYVREADDVSVSCEGPSIS
WRGDGKYFATMGEVFESGCMHKKIKIWESDSGALQSSSEAKDFMKAILEWMPSGAKIAAV
YKKKSDDGCPSIAFFERNGLERSSFSIGEPGDANVAFESLKWNSASDLLAGVVSCKTHDA
IRVWFFSNNHWYLKQEIRYPREAGVMVMWDPTKPTQLICWTLAGQVTVCNFMWVTAVMED
STAFVVDNNKILVTPLSLSLMPPPMYLFSLSFSSAVRDIAYYSRNSKNCLAVFLSDGNLS
FVEFPARDTWEDLEGRDFNAEVSECKTALGSVTHLLWLDVHSLLCVSAYGSSQNKCLSSG
SSETELHGPYLQEVEVVCHEDHVPDQVTSSGFAASVTSQTPLESPVMALAWNPSKRDSAF
VEFEGGKVLSYASRSGFMETRDSVCFPSACPWVRVAQVDVGGVHKPLVCGLDDMGRLYIN
GKSLCNNCSSFSFYSELDNEVVTHLIILTKQDFLFIVDTEDVLQGGEAALGNVYFVIDGR
KRDEEVMSYVNVWEKGAKVIGVLNGDEAAVILQTIRGNLECIYPRKLVLSSITNVLAQQR
FKDALNLVRRHRIDFNVIVDLYGWQAFLQSAVEFVVQVNNLNHVTEFVCAMKNEDVTETL
YKKFSFSKKRDKVSQAKDLSGSKVSSVLQAIRKALEEHIPESPSRELCILTTLARSDPPA
IEESLMRIKSVREMELQNSSSDDNSIKMSRPSAEEALKHLLWLLDSEAVFEAALGLYDLN
LAAIVALNSQRDPKEFLPYLQELERMSEPLMHFNIDLKLQRFDSALKSIVSAGDEYFPDC
MDLIKKNPQLFPLGLQLITDSEKKQAVLEAWGDHLTDEKRFEDAATTYLCCFNLEKASKA
YRECGDWSGVLRVGALMKLGKDEILKLAYELCEEVNALGKPGEAAKIALEYCGDISGGVN
LLINAREWEEALRVAFMHTEDGLISVVKSSALECAGGLVSEFKESIEKVGKYLTRYLAVR
QRRLLLAAKLKSEERSVIDLDDDTASEASSNLSGMSAYTLGTRRGSAASVTSSTATKARD
LRRQRKSGKIRAGSAGEEMALVDHLKGMRMTDGGKRELKSLLICLVTLGEKESAQKLQQT
AENFQVAQVAAVELADDTVSSESVDEELYSFERYALKTRSTARGSDAFSWMLKVFISP
NT seq 3957 nt   +upstreamnt  +downstreamnt
atgaaaaatttgaagcttttctcggaggtttctcagaacatccaattgcattcgacggga
gacgaagctgtacggttcgcagcttacgacatcgaccagagtcgcttgttcttcgcatct
tctactaacttcgtttacgcccttcacctctcttccttccaaaatgggagagattgtgcg
aagggtttgcctgtggaggtctgcagtattgatttggaggcaggggatttcatcactgcc
tttgattatctcgcggagaaggagtctttattaattgggacgtctcgtgggcttctgctt
gtgcacgaggtggagagcaatgtgactgagctagttgggaatatagaaggaggtgtcaag
tgtctctcccctagtcctactggagatctacttggattgattagcggttttggccagttg
cttgtaatgacttatgattgggatttgatgtacgagagggcgctttctgaggttactgaa
ggtggttacgtacgtgaagcggatgatgtgtctgtaagctgtgagggaccttccatttcc
tggagaggcgatgggaagtactttgcgacgatgggtgaggtttttgaatccggttgtatg
cataagaagattaagatatgggagagtgattctggcgctttgcagtcttcttcagaagca
aaagatttcatgaaggcgattcttgaatggatgcctagtggggcaaaaatcgcagctgtt
tataaaaagaagtcagatgatggatgcccgtcaattgctttcttcgagagaaacggactt
gagaggagctcatttagcatcggagagcctggagatgccaacgtagcatttgagtctctg
aagtggaattctgcatcggatcttcttgcaggggttgttagctgcaaaacacacgatgct
attagggtgtggttctttagcaacaaccactggtacctgaaacaggagattaggtatcca
agggaagctggggtaatggtcatgtgggatccaacaaagccaacgcagttgatatgttgg
actctggcagggcaagttaccgtttgtaattttatgtgggtgacggctgtcatggaggac
tcaacagcctttgtcgtagataataacaagattctcgtgacgccactgtctttgtccttg
atgccacctcctatgtatttgttcagccttagtttttcttccgctgtcagggacatagca
tattactcgaggaactctaagaattgtctggctgtgttcttgtctgatggaaacctgtct
tttgttgagtttcctgcacgtgatacttgggaagatcttgaaggtagggacttcaatgca
gaagtttcggagtgtaaaacagcgttgggctctgttacacatcttctatggctcgatgtc
cattcgcttctctgcgtctctgcttatggctctagccagaacaagtgtctctcttctggt
tcgtctgagacagagcttcacggtccttatttacaggaagttgaagtcgtctgtcatgag
gatcatgtacctgatcaagtaacatcctctggctttgctgctagcgttacttcccagaca
cctctcgagtcacccgtcatggctcttgcctggaaccctagcaagcgtgattccgccttt
gtagagtttgagggtgggaaagtgcttagctatgcatcaagatcaggctttatggaaact
cgtgatagtgtctgttttccatcagcttgtccttgggtgagggtggcgcaggttgatgtt
ggtggcgtgcacaagcccttggtatgtgggctagatgatatgggtagactgtacatcaac
gggaagagcctatgtaacaactgcagcagcttctcattttactcagagctggacaatgaa
gtggttacacatctgattatcttgaccaaacaggattttctctttatcgtcgacaccgag
gatgtactgcagggaggagaagcggcacttggaaacgtctactttgtgattgacggtaga
aagcgtgacgaggaagttatgagctacgtaaacgtttgggagaaaggtgccaaagtaata
ggagtcctcaacggagacgaagctgctgtgatattacaaactatccggggcaatctcgaa
tgcatttatcctagaaagctggtcctgtcttcaatcacgaacgtgttagctcagcaacgg
ttcaaagatgcattaaacttggtaaggcgacatagaatcgactttaacgttatcgtggac
ttatacgggtggcaggcgtttctacaatcagctgtagagtttgttgtacaagtaaacaat
ttgaaccacgttacggagtttgtttgcgccatgaagaacgaagatgtcacagagactctt
tacaagaagttctccttctccaaaaagagggacaaggtttcacaagcgaaggatctatcc
ggtagcaaagtgtcatcagttctacaggcaattagaaaagcccttgaagaacatatacca
gagagtccctcaagggagctttgtattttaaccactcttgctcgaagcgatccaccggct
attgaggagtctctcatgaggataaaatctgttcgtgagatggagttgcaaaactcctct
tctgatgataattcaatcaaaatgtctcgtccatctgcagaagaagccttgaaacacctt
ctctggttattagattcagaggccgtcttcgaagctgctttaggtctttatgacctgaac
cttgcagctatcgtggcgctcaattcccaacgcgatccgaaagagtttctaccttatctc
caggagctggagagaatgtccgaacccctgatgcatttcaacatcgaccttaaactgcag
cgtttcgatagcgctctcaagagcatcgtatcagcaggggatgagtactttcctgattgc
atggacttgatcaagaaaaaccctcagctcttcccgctgggacttcagctaatcaccgat
tctgaaaagaaacaagcggttctagaggcttggggagatcatctcactgatgagaaacgt
tttgaggatgctgctactacgtacctttgttgctttaacctcgaaaaggcttcgaaggcg
tatcgtgagtgtggtgattggagtggggtactcagagtaggcgcgctaatgaagttaggg
aaagatgagatcttgaaactggcgtacgagttatgtgaagaggtcaatgctcttgggaag
cctggggaagcagcgaagatagctttagagtattgcggagatataagcggtggagttaat
ttgcttatcaatgcgagagagtgggaagaagctttaagagttgcctttatgcatacagaa
gatggtttaatctcagtggtgaagagctctgctcttgagtgtgctggtggtctagtaagc
gaattcaaagaatcgatagagaaagtaggaaagtatttgactcggtatctagctgttagg
cagagacgtttgctgcttgcagcaaagctcaagtctgaggaacgctcagtcattgatctt
gatgatgacacagcttcagaagcaagtagcaacctgagtggaatgagcgcctatactttg
gggacaagaagaggttccgctgcttcagtcacctcaagcacggcgactaaggcaagagac
ttgaggcgccagagaaagagcgggaaaatccgtgctggcagtgcgggtgaggagatggcg
ctggttgatcatctgaaaggtatgcgtatgacagatggaggaaagcgagagctcaagtct
ttattgatatgtttggtaacacttggtgagaaggagtctgcacagaaactgcaacagact
gcagagaatttccaggtcgctcaggtagcagcagtggagctagcagacgatacagtgtcc
agcgagagcgtcgatgaagaattgtattcctttgaacgttacgctctgaagacgaggtcc
acggcacgaggctctgatgcgtttagctggatgcttaaggtgttcattagcccgtga

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