Brassica napus (rape): 106372276
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Entry
106372276 CDS
T04128
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106372276
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
106372276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
106372276
NCBI-ProteinID:
XP_013667907
UniProt:
A0A078FCP2
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Position
C9:58932643..58937445
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AA seq
1318 aa
AA seq
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MKNLKLFSEVSQNIQLHSTGDEAVRFAAYDIDQSRLFFASSTNFVYALHLSSFQNGRDCA
KGLPVEVCSIDLEAGDFITAFDYLAEKESLLIGTSRGLLLVHEVESNVTELVGNIEGGVK
CLSPSPTGDLLGLISGFGQLLVMTYDWDLMYERALSEVTEGGYVREADDVSVSCEGPSIS
WRGDGKYFATMGEVFESGCMHKKIKIWESDSGALQSSSEAKDFMKAILEWMPSGAKIAAV
YKKKSDDGCPSIAFFERNGLERSSFSIGEPGDANVAFESLKWNSASDLLAGVVSCKTHDA
IRVWFFSNNHWYLKQEIRYPREAGVMVMWDPTKPTQLICWTLAGQVTVCNFMWVTAVMED
STAFVVDNNKILVTPLSLSLMPPPMYLFSLSFSSAVRDIAYYSRNSKNCLAVFLSDGNLS
FVEFPARDTWEDLEGRDFNAEVSECKTALGSVTHLLWLDVHSLLCVSAYGSSQNKCLSSG
SSETELHGPYLQEVEVVCHEDHVPDQVTSSGFAASVTSQTPLESPVMALAWNPSKRDSAF
VEFEGGKVLSYASRSGFMETRDSVCFPSACPWVRVAQVDVGGVHKPLVCGLDDMGRLYIN
GKSLCNNCSSFSFYSELDNEVVTHLIILTKQDFLFIVDTEDVLQGGEAALGNVYFVIDGR
KRDEEVMSYVNVWEKGAKVIGVLNGDEAAVILQTIRGNLECIYPRKLVLSSITNVLAQQR
FKDALNLVRRHRIDFNVIVDLYGWQAFLQSAVEFVVQVNNLNHVTEFVCAMKNEDVTETL
YKKFSFSKKRDKVSQAKDLSGSKVSSVLQAIRKALEEHIPESPSRELCILTTLARSDPPA
IEESLMRIKSVREMELQNSSSDDNSIKMSRPSAEEALKHLLWLLDSEAVFEAALGLYDLN
LAAIVALNSQRDPKEFLPYLQELERMSEPLMHFNIDLKLQRFDSALKSIVSAGDEYFPDC
MDLIKKNPQLFPLGLQLITDSEKKQAVLEAWGDHLTDEKRFEDAATTYLCCFNLEKASKA
YRECGDWSGVLRVGALMKLGKDEILKLAYELCEEVNALGKPGEAAKIALEYCGDISGGVN
LLINAREWEEALRVAFMHTEDGLISVVKSSALECAGGLVSEFKESIEKVGKYLTRYLAVR
QRRLLLAAKLKSEERSVIDLDDDTASEASSNLSGMSAYTLGTRRGSAASVTSSTATKARD
LRRQRKSGKIRAGSAGEEMALVDHLKGMRMTDGGKRELKSLLICLVTLGEKESAQKLQQT
AENFQVAQVAAVELADDTVSSESVDEELYSFERYALKTRSTARGSDAFSWMLKVFISP
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttgaagcttttctcggaggtttctcagaacatccaattgcattcgacggga
gacgaagctgtacggttcgcagcttacgacatcgaccagagtcgcttgttcttcgcatct
tctactaacttcgtttacgcccttcacctctcttccttccaaaatgggagagattgtgcg
aagggtttgcctgtggaggtctgcagtattgatttggaggcaggggatttcatcactgcc
tttgattatctcgcggagaaggagtctttattaattgggacgtctcgtgggcttctgctt
gtgcacgaggtggagagcaatgtgactgagctagttgggaatatagaaggaggtgtcaag
tgtctctcccctagtcctactggagatctacttggattgattagcggttttggccagttg
cttgtaatgacttatgattgggatttgatgtacgagagggcgctttctgaggttactgaa
ggtggttacgtacgtgaagcggatgatgtgtctgtaagctgtgagggaccttccatttcc
tggagaggcgatgggaagtactttgcgacgatgggtgaggtttttgaatccggttgtatg
cataagaagattaagatatgggagagtgattctggcgctttgcagtcttcttcagaagca
aaagatttcatgaaggcgattcttgaatggatgcctagtggggcaaaaatcgcagctgtt
tataaaaagaagtcagatgatggatgcccgtcaattgctttcttcgagagaaacggactt
gagaggagctcatttagcatcggagagcctggagatgccaacgtagcatttgagtctctg
aagtggaattctgcatcggatcttcttgcaggggttgttagctgcaaaacacacgatgct
attagggtgtggttctttagcaacaaccactggtacctgaaacaggagattaggtatcca
agggaagctggggtaatggtcatgtgggatccaacaaagccaacgcagttgatatgttgg
actctggcagggcaagttaccgtttgtaattttatgtgggtgacggctgtcatggaggac
tcaacagcctttgtcgtagataataacaagattctcgtgacgccactgtctttgtccttg
atgccacctcctatgtatttgttcagccttagtttttcttccgctgtcagggacatagca
tattactcgaggaactctaagaattgtctggctgtgttcttgtctgatggaaacctgtct
tttgttgagtttcctgcacgtgatacttgggaagatcttgaaggtagggacttcaatgca
gaagtttcggagtgtaaaacagcgttgggctctgttacacatcttctatggctcgatgtc
cattcgcttctctgcgtctctgcttatggctctagccagaacaagtgtctctcttctggt
tcgtctgagacagagcttcacggtccttatttacaggaagttgaagtcgtctgtcatgag
gatcatgtacctgatcaagtaacatcctctggctttgctgctagcgttacttcccagaca
cctctcgagtcacccgtcatggctcttgcctggaaccctagcaagcgtgattccgccttt
gtagagtttgagggtgggaaagtgcttagctatgcatcaagatcaggctttatggaaact
cgtgatagtgtctgttttccatcagcttgtccttgggtgagggtggcgcaggttgatgtt
ggtggcgtgcacaagcccttggtatgtgggctagatgatatgggtagactgtacatcaac
gggaagagcctatgtaacaactgcagcagcttctcattttactcagagctggacaatgaa
gtggttacacatctgattatcttgaccaaacaggattttctctttatcgtcgacaccgag
gatgtactgcagggaggagaagcggcacttggaaacgtctactttgtgattgacggtaga
aagcgtgacgaggaagttatgagctacgtaaacgtttgggagaaaggtgccaaagtaata
ggagtcctcaacggagacgaagctgctgtgatattacaaactatccggggcaatctcgaa
tgcatttatcctagaaagctggtcctgtcttcaatcacgaacgtgttagctcagcaacgg
ttcaaagatgcattaaacttggtaaggcgacatagaatcgactttaacgttatcgtggac
ttatacgggtggcaggcgtttctacaatcagctgtagagtttgttgtacaagtaaacaat
ttgaaccacgttacggagtttgtttgcgccatgaagaacgaagatgtcacagagactctt
tacaagaagttctccttctccaaaaagagggacaaggtttcacaagcgaaggatctatcc
ggtagcaaagtgtcatcagttctacaggcaattagaaaagcccttgaagaacatatacca
gagagtccctcaagggagctttgtattttaaccactcttgctcgaagcgatccaccggct
attgaggagtctctcatgaggataaaatctgttcgtgagatggagttgcaaaactcctct
tctgatgataattcaatcaaaatgtctcgtccatctgcagaagaagccttgaaacacctt
ctctggttattagattcagaggccgtcttcgaagctgctttaggtctttatgacctgaac
cttgcagctatcgtggcgctcaattcccaacgcgatccgaaagagtttctaccttatctc
caggagctggagagaatgtccgaacccctgatgcatttcaacatcgaccttaaactgcag
cgtttcgatagcgctctcaagagcatcgtatcagcaggggatgagtactttcctgattgc
atggacttgatcaagaaaaaccctcagctcttcccgctgggacttcagctaatcaccgat
tctgaaaagaaacaagcggttctagaggcttggggagatcatctcactgatgagaaacgt
tttgaggatgctgctactacgtacctttgttgctttaacctcgaaaaggcttcgaaggcg
tatcgtgagtgtggtgattggagtggggtactcagagtaggcgcgctaatgaagttaggg
aaagatgagatcttgaaactggcgtacgagttatgtgaagaggtcaatgctcttgggaag
cctggggaagcagcgaagatagctttagagtattgcggagatataagcggtggagttaat
ttgcttatcaatgcgagagagtgggaagaagctttaagagttgcctttatgcatacagaa
gatggtttaatctcagtggtgaagagctctgctcttgagtgtgctggtggtctagtaagc
gaattcaaagaatcgatagagaaagtaggaaagtatttgactcggtatctagctgttagg
cagagacgtttgctgcttgcagcaaagctcaagtctgaggaacgctcagtcattgatctt
gatgatgacacagcttcagaagcaagtagcaacctgagtggaatgagcgcctatactttg
gggacaagaagaggttccgctgcttcagtcacctcaagcacggcgactaaggcaagagac
ttgaggcgccagagaaagagcgggaaaatccgtgctggcagtgcgggtgaggagatggcg
ctggttgatcatctgaaaggtatgcgtatgacagatggaggaaagcgagagctcaagtct
ttattgatatgtttggtaacacttggtgagaaggagtctgcacagaaactgcaacagact
gcagagaatttccaggtcgctcaggtagcagcagtggagctagcagacgatacagtgtcc
agcgagagcgtcgatgaagaattgtattcctttgaacgttacgctctgaagacgaggtcc
acggcacgaggctctgatgcgtttagctggatgcttaaggtgttcattagcccgtga
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integrated database retrieval system