Brassica napus (rape): 106372413
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Entry
106372413 CDS
T04128
Name
(RefSeq) 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna00730
Thiamine metabolism
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
106372413
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106372413
Enzymes [BR:
bna01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
106372413
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-GeneID:
106372413
NCBI-ProteinID:
XP_013668075
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Position
A10:complement(16745907..16749257)
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AA seq
716 aa
AA seq
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MFFFNFSLLSYFDPRSFLLFMGSTSIGYQAGISARFDDRNLNLRSDATLSSLPCKVDFSR
KSFLSAATSTHNKECSNRARVCSLPNTDEKLETPLLDSIETPSQLKNLTVKELKVLADEI
RTELLSVLWKTRKSMKPSLAAIELTLALHYVFRAPVDKILWDAVEQTYAHKVLTRRWSSI
PSRQNNGVSSVTSRLESEYDSFGTGHGCNSISAGLGLAVARDIKGKRDRVVAVIDSVTIT
AGQAYEAMSNAGYLDSNMIVILNDNRHSLHPNMADGSKASISALSSFMSKIQSSQIFRKF
RELAKAMTKKIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCV
LREVASLDSMGPVLVHVITEEKRDAETANIVVKDRRTYSDCFAEALVKEAEKDRDIVVVH
AGIEMDPSLVTFQERFPERFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYDQV
VHDVDRQRRAVRFVITSAGLVGSDGPVQCGAFDIAFMSCLPNMIAMAPANEDELVNMVAT
AANVTDRPVCFRFPRGAIVNKNYLVPIGLPIEIGRGRVLLEGQDVALLGYGAMVQNCLNA
HSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITVEEGCVGGFGSHVAQFIALDG
QLDGKIKWRPIVLPDGYIEEASPNEQLALAGLTGHHIAATALSLLGRTREALLLMS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgttttttttcaatttttctttattgtcctactttgatccacgaagctttcttctcttc
atgggttcaacctcgattggttatcaagccggaatctcagctcgatttgatgacaggaat
cttaatctgaggtcagatgctaccctctcctcgcttccatgtaaagttgatttttccaga
aagagcttcttgtcagctgcaacctccactcacaacaaggaatgttcaaatcgagctcgg
gtatgttctttgccaaatactgatgagaaacttgagacgccattactagacagcattgag
actccatcgcagttgaagaatttgactgtaaaggagttgaaggtattagctgatgagatc
cgtactgagcttctctctgtactgtggaagacccgaaagtctatgaaacctagcttggct
gccatagagcttacccttgctttgcattatgtgtttcgtgcccccgttgacaaaatatta
tgggatgctgtggaacaaacatatgcacataaagtcttgacaagacgttggtcttctata
ccatcaagacaaaacaatggtgtttctagcgtcacttctcgattggagagtgaatacgat
tcttttgggaccggccatggctgcaacagtatctctgctgggctcggcttagcagtcgct
cgtgatataaaagggaagagggaccgggttgttgctgttatagacagtgtgacaatcact
gcaggtcaagcatatgaggcaatgagcaatgctggttacttggactctaatatgattgtt
atcctaaatgataaccgtcactccctgcatccaaatatggcggatggatccaaggcatcc
atcagtgcactatctagcttcatgagcaaaatccagtctagccaaatctttcgaaaattt
agagaactagccaaagctatgacaaagaaaatcggaaaggggatgtatgaatgggcagcc
aaagtggatgagtatgcacgtggtatggtgggaccaacaggatcaaccctctttgaagaa
cttggtttgtactacattggtcctgttgatggacacaacattgaagatctagtttgtgtt
ctccgagaagtagcttctctagattcgatgggtcctgtattggttcatgtgatcacagag
gagaagcgagatgcagaaaccgcaaacatcgtggtcaaagatagacgcacttacagtgat
tgctttgctgaggctttggtgaaggaagccgagaaggatagagatattgtagtagtccac
gcaggaatagaaatggatccatcactcgttacgtttcaggagaggtttccagagaggttt
ttcaatgtcggtatggctgaacagcacgctgtcacattctctgctggtctttcttctggt
ggtctcaagcccttttgcattatcccctctgcttttctacaaagagcttatgaccaggtg
gtccatgacgtagataggcagagaagggcggtgagatttgttattacaagcgcagggctt
gttggatccgatggtcctgtgcagtgtggagcttttgacatagctttcatgtcatgctta
ccaaacatgatagctatggctccagccaatgaggatgagcttgtgaatatggttgcaact
gcagctaacgtcactgaccgcccggtttgtttccggttccccagaggcgccatcgtcaac
aagaactatctcgtccccattggattaccaattgaaatcggaagaggaagagttctatta
gaaggtcaagatgtggctttgctcgggtatggagccatggttcagaactgtctgaatgct
cactcgcttctctcgaaactcggtttgaacgtgacagtagctgatgcaagattctgcaaa
cccctggacattaagcttgtgcgtgatctttgtcagaaccacaaattccttatcacggtc
gaagaaggctgtgttggagggtttggatcccatgtggctcagttcatagcccttgatggc
cagctcgatggaaaaatcaagtggagaccgattgtgttaccggatgggtacatagaagaa
gcgtcgcctaacgagcagcttgcacttgcggggctaacgggacatcacatagcagcaacc
gctctgagtctattaggtcgaactcgtgaagcactgctcctcatgagctaa
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