Brassica napus (rape): 106372422
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Entry
106372422 CDS
T04128
Name
(RefSeq) WD repeat-containing protein 43-like isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106372422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106372422
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106372422
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Utp12
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_EML
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
EIF3I
CFAP251_N
NBCH_WD40
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_NOL10_N
PQQ_2
Beta-prop_RIG_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106372422
NCBI-ProteinID:
XP_013668084
LinkDB
All DBs
Position
A10:complement(16789309..16793089)
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AA seq
621 aa
AA seq
DB search
MNLVNIKDVLTSFSPALDYLALSTGDGRIKIWDTVKGQVQTEFADIASAEETNIYTSGGK
GHLSVDYTCMKWLSLERKKKRKLGTSILVLGTGGGDVLALDVASGQLKWRISDCHPGGVN
AVSSSTKASCIYSGGADGMVCEIDPHSGNVIRKFKASTKAVSSLSVSPDGKILATASAQL
KTFKCSDLKKIQKFTGHPGGVRCVAFTEDGKFILSSAVGERYIAVWKTDGAKMQSASCVL
ALEHPPVFVDSWGETDEKGLYVLAISEVGVCYFWYGSNVEELSNAKPTKVALATEGSSSL
KQHKGSLPTIFAAKLQGILKPGSANAFIASGLLVKPSFQKMVLQFGNDLVLNASKNGILL
PITQSASKSKKGQGVQNKVTTLDRAHAEDALLPIARVADLHEKKSVQPQSSDKDTDMIDQ
SQADYVETFSMEDKLRSLGILKGTDEPSSLSYASVIDGIDLEAHLPPKKLKSAVLSMAPS
TAFKTLEALVAMWQTSFVNRGCGGKYLLPWIYSIMVNHRHYIMSQEPKNQQLLNTLHKIT
KSRGAALQQLLQLSGRLQLVTAQINKAAGKETQTKVHEQETDESEDEEDDVEEHFYGEKD
NDSELSSDDGKDEDDTLMEEI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggtgaacattaaggatgtgttgacttctttcagtcctgctcttgattatcta
gctcttagcaccggagatggtcgtatcaagatttgggatacagtcaagggtcaggtccaa
acagagtttgctgatattgcatctgcagaagagactaacatatataccagcggtgggaaa
ggtcatctctcggttgattatacctgcatgaaatggttgtctctggagagaaagaagaag
agaaaacttggaacttcgatattggtattagggactggtggaggagatgtgttagctctt
gatgtagcttctggtcagcttaaatggaggataagcgactgtcatcccggtggcgtgaat
gctgtctcttcgtctacaaaagcctcttgcatatacagcggtggggcagatgggatggtt
tgtgaaattgatccccatagtggaaatgtgatcagaaagttcaaagcctcaacaaaagca
gtttcttctttatctgtttcaccagatggaaaaatattagccactgcatctgctcagttg
aagactttcaagtgctctgatctcaagaaaattcagaagtttactggtcatcctggaggt
gtgcgttgtgtggcgtttaccgaggatggcaagttcatcctctcatctgcagttggtgaa
agatatatagcagtatggaaaacagatggtgctaagatgcagtcagctagctgtgtcctt
gccctcgagcaccctcccgtcttcgtggatagttggggtgaaactgatgaaaagggatta
tatgttttagcaatttcagaagtaggcgtctgctatttttggtatggatcaaatgttgag
gagctaagcaatgccaaacctactaaagtcgcattagcaactgaagggtcttcttcgctt
aaacaacacaagggctcattgcctacaatctttgctgcaaaattgcaaggcattttgaag
cctggttctgcgaatgcctttattgcttctggattgctggtgaagccatcattccagaaa
atggtgttgcagtttggcaacgacttggtgctgaatgcctctaagaatggcatacttctc
cccatcacccagtcagcttccaagtccaagaaggggcaaggcgtgcaaaataaagttaca
acattggaccgcgcacatgcggaggatgctttgctgccaattgcaagagttgctgatctg
cacgagaaaaagagtgtacaaccacagtcatctgacaaggatacagacatgattgaccaa
agtcaagcagattatgtagagacatttagcatggaggataagttgagatcattagggata
cttaaaggcacagatgaaccaagcagtctttcctatgcttcagtgattgatggaattgat
cttgaggctcatctaccaccgaagaagttaaagtctgctgttttgtcaatggcaccctcc
actgcattcaagacactagaagctctggttgctatgtggcagacgagttttgttaacagg
ggatgtggtggcaagtatcttcttccatggatatacagtataatggtgaatcatcgtcat
tacatcatgtcccaagaacccaaaaaccaacagctacttaatacattgcacaagataact
aagtccagaggagcggctcttcaacagttactacagttatctgggcgcttacagcttgtt
acagctcagatcaataaagctgcagggaaagaaactcaaacaaaggtgcatgagcaagag
actgatgaaagtgaagatgaggaagatgatgtagaagagcatttctatggtgagaaggat
aatgattccgaattaagcagcgacgatggaaaggatgaagatgacaccttgatggaagag
atataa
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