Brassica napus (rape): 106372591
Help
Entry
106372591 CDS
T04128
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106372591
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106372591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
106372591
NCBI-ProteinID:
XP_013668289
LinkDB
All DBs
Position
A10:complement(19447847..19450884)
Genome browser
AA seq
576 aa
AA seq
DB search
MASYRPPPPPSPLPPPPQNPPPPPPLPPSLPPPVPPPPPSHQPYAYPPHTYYQQPSHYPP
PQFNQHQAPPPPPPPPSAPPPTVPEPPRNQSTNDRHKAASKPPRERPPSKQHHRPHHPSS
KNPEEERRQRKKREAEKERQQLKSSSHKSQVPKGHTEERKPTPLLTADRVENRLKKPTTF
ICKLKFRNELPDPTAQLKLMTIKRDKDQYTKYTITSLEKLWKPKIFAEPDLGIPLDLLDL
SVYKPPKVRQPLAPEDEELLRDDDAVTPIKKDGIKRKERPTDKGVSWLVKTQYISSINNE
STRQSLTEKRAKELREMKGGVDILQNLNNRERQIKDIEASFEACKSRPVHATNKKLQPVE
VLPLLPYFDRYEEQFVVANFDSAPTADSEFFGKLDSSIRDEHESRAVLKSYVIAGSDNSN
PEKILAYMVPSLDELSKDMHDENEDISYTWVREYLWDIPPKEPNERDTYLVSFEDGTASY
LPLPTRLNMRKRRAREGRASDEIEHLPVPSRVTIRNRSSVSIIEHKDSMVNTNSRNGASS
SKMRRLEDEEGLGRSWKHGSEQDANQYSDNNDDYSE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtaccggccgccgccacctccgtctcctctcccaccgccgcctcaaaatccc
ccacccccaccacctcttcctccgtcgttaccccctccggttcctcccccaccgccgtcg
catcaaccttacgcttatcctccgcatacttactatcagcagccgtctcactatcctcct
cctcaattcaaccagcatcaagctcctccgccgcctcctcctcccccctcagcacctcct
cccaccgtacccgagcctcctcgaaaccaatcgaccaatgaccgccacaaagcggcctcc
aagccgccgcgggagcgtcctccatcgaagcagcaccacaggcctcatcacccttctagt
aagaatccggaagaagagaggaggcaaaggaagaagagggaggccgagaaagagaggcag
cagctgaaatcgtcgtctcacaagtctcaggttcccaaggggcacacggaggagaggaag
cctacgcctcttctcaccgctgatagggtcgagaatcggttaaagaaaccaaccaccttc
atctgcaagctcaagttccggaatgagcttcctgatcctactgcacagcttaagcttatg
accatcaagcgtgataaagatcaatatacaaagtataccatcacatctctggagaagtta
tggaaaccaaaaatctttgctgagcctgatcttggaataccattggatcttcttgaccta
agtgtctacaagccaccgaaagtgaggcagcctcttgcccctgaagatgaagaactgttg
cgtgatgatgatgctgttactcctatcaaaaaagatggcatcaagagaaaagaacgacct
accgataaaggtgtttcatggctcgtcaaaacgcagtacatttcttctattaataatgaa
tccacaagacagtctctaacggagaaaagagcaaaggaactgcgagagatgaaaggaggc
gtcgacatcttgcagaatcttaacaatagagagagacagatcaaggatattgaagcatcc
ttcgaggcctgcaaatcccgaccagttcatgccaccaataaaaaattgcagcctgttgaa
gttttaccactattgccatattttgataggtacgaggagcagtttgtggtagcgaatttt
gatagtgctcctacagctgattctgagttttttggcaagttggactcttcaattcgtgat
gaacatgaatcacgggccgttttaaaaagctatgtaattgctggatcggacaatagcaat
cccgaaaaaatcctggcctacatggttccttccttggacgagttgtctaaggacatgcat
gatgaaaacgaggatatctcttatacttgggtccgcgaatacctctgggatataccacca
aaggaaccaaacgagcgtgacacatacctggtgtcgtttgaggatgggaccgctagctat
ttgcccctaccaactaggctgaacatgaggaagagaagggccagggaaggaagagcgtct
gatgagattgaacacttgccagtaccctcaagggtgactataaggaacagatcgtctgta
tcaataatcgaacataaagattcaatggttaatacaaattctaggaatggtgcgtcgagc
tccaagatgagaaggttagaggacgaagaaggccttggcagatcttggaaacacgggtcg
gaacaagatgctaatcaatatagtgataataatgatgattattctgagtga
DBGET
integrated database retrieval system
