Brassica napus (rape): 106372648
Help
Entry
106372648 CDS
T04128
Name
(RefSeq) heat stress transcription factor A-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106372648
Transcription factors [BR:
bna03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
106372648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
TMF_TATA_bd
KIF21A_4th
ATG16
YabA
FKBP15
TMF_DNA_bd
DUF3450
SNARE
TPR
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
106372648
NCBI-ProteinID:
XP_013668364
UniProt:
A0A817B914
LinkDB
All DBs
Position
A10:19124843..19127113
Genome browser
AA seq
387 aa
AA seq
DB search
MSPEKDGVSIPLHVDITDVASPLPMPLDILHGNPIPPFLSKTFDLVDDPSLDPVISWGLT
GASFVVWDPVEFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFANEAFLRGQKHL
LKNIHRRRSPQSNQACSSSITSQQSQGSPTEVGEEIEKLRKERRALMEEMVELQQQNRGT
ARHVDTVNQRLKAAEQRQKQMLSFLAKLFQNPGFLDRLKSLKGEGGGLGFEKARKKFIKH
SPTGGEIVKYEADDWERLLMSEEKDTENILPSNQGMTSTDPKGKNLMNPSEEETMNQDYF
LPFPTPEGLIKQEETWSMGFDTTIPSFSNEDVWGNTMDYNVAEFGSVPETSSGGCLPDVC
WEQFAAGMTETGFNWPPGDDTTPMDDP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagagaaggatggtgtttccatacctctccacgtcgacataacagacgtggct
tctccactccccatgccgctagacatcttgcacgggaacccaatcccgccgtttctatcc
aaaacgttcgatttggtggatgatccgagtctcgacccggtcatatcttgggggctgacc
ggcgcgagcttcgtcgtctgggaccctgtggagttcgccagaatcatactcccgcggaat
tttaaacacaacaatttctccagcttcgtcagacagcttaacacttatggattccggaag
attgataccgacaaatgggaattcgccaacgaggctttccttagaggacagaagcatctt
ctcaagaacattcaccgtcgccgttcgccacaatccaaccaagcttgcagcagtagcatc
accagccaacaaagccaagggtcacccaccgaggtcggagaagagatcgagaagctgagg
aaagagcgccgcgcgttgatggaagaaatggttgagcttcagcagcaaaacagaggcact
gctcgtcacgtggacactgtgaaccagaggctgaaagctgctgagcagcggcagaagcag
atgctctctttcttggctaagttgtttcagaacccaggcttcttggaccgcctcaagagc
ctcaaaggagaaggagggggtcttggattcgaaaaggcgagaaagaagttcatcaagcac
tccccaacaggaggggagattgtgaagtatgaagctgatgactgggagagactgttaatg
tcagaggaaaaagacactgagaacattctaccctcaaaccaggggatgacttcaaccgat
ccaaaagggaagaacctgatgaatccatcagaagaagaaacaatgaatcaagattacttc
ttaccttttccaactcctgaaggacttatcaaacaagaagagacttggagcatgggtttc
gacactacaataccgagtttcagcaacgaggatgtgtggggaaacacaatggactataat
gtcgcagagtttggttctgttccagaaacatcaagtggtggttgtttgcctgatgtatgt
tgggaacagtttgctgcagggatgacagagactggattcaactggccacctggtgatgat
actactccaatggatgatccttaa
DBGET
integrated database retrieval system
