Brassica napus (rape): 106372716
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Entry
106372716 CDS
T04128
Name
(RefSeq) protein PAT1 homolog 2
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106372716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106372716
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106372716
mRNA degradation factors
5'-3' decay
Decapping complex
106372716
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106372716
NCBI-ProteinID:
XP_013668451
UniProt:
A0ABQ8BDD9
LinkDB
All DBs
AA seq
767 aa
AA seq
DB search
MERSDSRDLYYNLARASSSSNNNSTLFDASQYEFFGQSLEEVELGGLDDDDAASVLGHAD
DGDGYHLFDKREGAGLGSLSEMDDLATTFAKLNRVVSGPKHPGVIGDRGSGSFSRESSSA
TDWTQDNEFTSWLDQQTLEEQAHEPSWSSQPQQPSANSNSLHRTSSYPQQQAQLQHYNSE
PIIVQESTFTSFPTPGNRSQISSPSHIHRAPSLPGSSQLNLPAPNSAFHLSGLSHGPPHY
NSNLARYASCGPTLGNTVQPPHWVTDPGLLLHGDRSGLLHSLVQQQQQQLQLPPRNGFTS
QQLISLQQRQSLAHLAALQSQLYSSCPSPSRQEVREHKHKPSHRSRKNRSGGGLSQQASL
SSQKSETGLQFRSKYMTSEEIESILKMQHSNSHSSDPYVNDYYHQARLTKTSSGSRAKTQ
FCPSHLKDHQSRSSRNSSSSDQQQPQVHVDALGKITLPHVCRPRALLEVDSPPGSRHHLE
QEPLVAARVTIEDAFGVLIDIVDLDRTLQCNRPQDGGSQLMRKRQLLLEGLATSLQLVDP
FSKTGQKTKDDIVFLRIATLPKGKKLLTKYLQLLVPGTEIARVVCMAVFRHLRFLFGAAA
SETVANLANAVTVCVQAMDLRALSGCLAAVVCSSEQPPLRPIGSPSGDGASVVLVSLLER
AAEVVKNSNDGLWRASFDEFFSLLTKYCRSKYETIHGQKQENAAADVLEVAIKREMPAEL
LRASLRHTSEDQRNFLLNFGRKGSSPPVSELKTGARGGQVSSESVRA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctgattctagagatctttactacaacttagctcgagcttcttcatctagt
aataataatagtacactctttgacgcatctcaatatgagttctttggtcaaagtcttgaa
gaagttgaattgggaggtcttgatgatgatgatgccgcttctgttctcgggcatgccgat
gatggtgatgggtatcacctgtttgataaaagagagggtgcaggtttgggatcattgtct
gaaatggatgatcttgccacaacttttgctaagctgaacagagttgtttccgggcccaaa
caccctggagtaattggtgatagaggatcaggttctttttcaagggaaagttcctctgct
acagattggacgcaggataatgagttcacaagctggttggaccagcagacgcttgaagag
caagcacacgaacctagctggtcttcacagccacaacaaccttcagctaactcaaactct
ttgcacagaacatcctcatatcctcagcagcaagcacaactgcagcattacaatagcgaa
ccgatcattgtacaagagtctaccttcacctcttttcctacgcctggaaacagatctcaa
atatcttcaccgagccatatccatcgcgctccttctctccctggtagtagccagctgaac
ctccctgcaccaaactctgctttccatctctcaggattgtcacacggaccgccacactac
aacagtaacttggctagatatgcctcatgtggtcctactcttggcaacacggtgcaacct
cctcactgggttactgaccctggccttcttctgcacggtgatcgctccggattgttacac
agtctagttcaacagcagcagcagcagctgcagcttcctcctcgtaacggttttacatca
cagcagctgatctcgcttcagcagagacaatctctagctcatctcgccgcgttacagtcc
cagctctacagctcatgcccctccccatcgcgtcaagaagtaagggaacacaaacataag
ccctctcataggagccgcaaaaacagaagtggaggaggcctctcccaacaggcatctctc
tccagccagaaaagcgaaaccggacttcagttcagatcaaagtacatgacgtcagaagag
atagagagtatcctcaagatgcagcattcaaactcacacagcagtgacccttacgtcaac
gattattaccaccaagctcgactaaccaaaacgtcctccgggtctagagcaaagactcag
ttctgcccttctcatctaaaagaccaccaatctcgctcgtcccgtaacagtagcagctca
gatcagcaacaaccgcaagtccacgtggatgctcttggaaagatcactcttcctcacgtt
tgcaggccacgcgctttactagaggttgactctcctcctggctctcgtcatcatctggag
caggagcctcttgttgcagctagagtcaccatcgaagatgcttttggagttctgatcgat
atagttgaccttgataggactctccagtgcaaccgtccgcaagacggtggctctcagctc
atgagaaagcgtcagctcctcttagaaggcttagcgacctctctccaactcgttgatccc
ttcagcaaaaccggtcagaaaaccaaagacgacatcgtctttctacgcatagcgactctt
cccaaggggaagaaactgctcacaaagtatctacagcttcttgtccccggcactgagatc
gctagggttgtctgcatggctgtgtttcgccacctcaggtttttattcggtgccgctgcg
tcagagacggtagctaaccttgctaacgcggttactgtctgtgtccaagcgatggatctc
cgagcgctgagtggttgtcttgcggctgttgtctgttcttcagagcagccgcctctccgt
ccgataggaagcccttctggggatggagcgtctgttgtgttggtgtctcttctcgagaga
gctgctgaagtagtgaaaaactcgaatgatggactgtggagagcctcgtttgatgagttc
ttctcgcttcttaccaaatattgtaggagtaagtatgagacgatacatgggcagaagcag
gagaatgcagcagctgatgtgttggaggtagctataaagagggagatgcctgctgagctt
ttacgcgcgagcctgcgtcatacgagtgaagaccagcggaactttttgctgaactttggt
cggaaaggttcttcaccgcctgtgagcgagttgaaaaccggtgcaaggggtggccaggtt
agctctgagtctgtcagggcttaa
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