Brassica napus (rape): 106373244
Help
Entry
106373244 CDS
T04128
Name
(RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like
KO
K14487
auxin responsive GH3 gene family
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106373244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
106373244
NCBI-ProteinID:
XP_048621346
LinkDB
All DBs
Position
C8:47619986..47624333
Genome browser
AA seq
585 aa
AA seq
DB search
MVGVSVLQTSKIANMSLGCDLSVLEELTSNAKKIQDDVLTKILKANANTEYLSLFLEGSS
DKELFKKNVPVVSYEDVKPYIDRVANGEPSDIISGEPITTFNRSSGTSSGNQKIYPANNI
YFENMRSGYALSSVVMSKHVDGYKQGKMMIFRFTHKISPTPCGLPIAPALTSFTKSKYYS
SMAKNSTSPYEVALCPDPKQSMYCQLLCGLVQRDEVVSVGTTFPSVLVQIVHFLENYWKE
LSSNIRSGHVSDWITDLSCRDSVSIILGEPNAELADLIEKECGQESWQGIITRLWPKTKC
IETIVTGTMSQHIPALDYYSNKLPLVSKVYASSEAFYGLNLNPLSKPQHVSYTFLPNMSY
FEFIHVDADGEATCEIVDLVDVKLGDYYEPLVTNYSGLHRCKVGDILQVTGFYNNTPQFR
FVRRKNTVLCVDVEPTTEEDISKALARATVVLESSDLILTGFTCYGDISTVPGHYVFYVE
LKAKVNNGTTVLQLDNKVLVEYCCVMEESLSGIYRRLRGDEGSIGALEIRVVQKGTFDSL
MEFFVSRGSSISQYKTPICIKSTEALQVLEDKVLARFFSDRSPTL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgttagtgtgttacagacatctaaaatagcaaatatgagtctaggctgtgat
ctctctgttctggaagagcttacttcaaatgccaagaaaatacaagatgatgtattgacc
aagatacttaaagctaacgcaaacacagagtacctcagcctttttctcgagggaagctct
gacaaagagctgttcaagaagaacgtaccagtggtgagctatgaagatgttaagccttat
atcgatcgtgtggcgaacggagaaccctcggacatcatttcgggagaacccattactacg
tttaaccgaagctctggaacttcaagtgggaatcaaaagatatatcctgcgaacaacatc
tactttgagaatatgcgatccggctatgcactaagctctgtcgttatgtccaagcatgta
gatggttataagcaaggaaaaatgatgatatttaggttcactcacaagatatccccaact
ccttgtggtttgcctattgctcccgcgctaacgagcttcacaaagagcaaatattattcg
agcatggcaaaaaatagtacaagcccatatgaggtcgcactgtgtccggatcccaaacag
agtatgtactgtcaacttctatgtggtcttgtccagagagacgaggttgtaagtgtcggt
actacgttcccctctgtcttggttcaaatagtccattttcttgaaaattactggaaagag
ttgtctagtaatatccgatctggtcatgtcagcgactggatcaccgaccttagttgtaga
gattctgtctctatcatccttggagaaccaaatgctgaattggcagatttaatcgaaaaa
gaatgcggacaagaatcttggcaaggtatcattacaagactttggcccaaaaccaaatgc
attgaaactattgttacaggaactatgtctcaacacatcccagcactggattactactct
aataaactgcctctagtttccaaagtttatgcatcctctgaagcattttacgggttaaat
ttgaatcctctaagcaaaccacaacatgtgtcctacacattcctacccaacatgtcatat
ttcgagttcatacatgttgatgccgatggagaagccacatgcgagattgttgatcttgtg
gatgtgaagttaggtgactactatgagcccttggtcacaaactattccggtttacacaga
tgtaaagtgggagatattttacaggtcactgggttttacaataacacaccacaattcaga
ttcgtacgtagaaaaaatacggttttatgcgtcgatgtagagccaacaactgaagaagat
atttcaaaggcgttggctcgtgcaacagtcgttcttgaatcttcggatttgattttgaca
ggcttcacatgctatggtgacatctccactgtaccgggtcactacgtcttttacgtggaa
ctcaaagccaaagtcaacaatggcaccaccgttctacaacttgataacaaggtgttggtg
gagtattgttgtgtcatggaggaatcattgagtggtatttataggagacttaggggagat
gagggatcgattggagctctagagataagggttgtgcaaaaaggaacgtttgattctctc
atggagttctttgtctcgcgaggttcttctatatctcaatacaagacacctatatgcata
aagtctactgaggctttacaggttcttgaagacaaggttcttgctcggttcttcagcgac
agatcccctactctctga
DBGET
integrated database retrieval system
