Brassica napus (rape): 106373523
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Entry
106373523 CDS
T04128
Name
(RefSeq) trans-Golgi network-localized SYP41-interacting protein 1 isoform X1
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAUS-augmin3
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
106373523
NCBI-ProteinID:
XP_048636471
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All DBs
Position
A1:complement(3149954..3157586)
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AA seq
2034 aa
AA seq
DB search
MDKKKNRADPLAAGRQKLQQFRQKKADKSTDHKKDPKGSTSQGKSSKKSGKKHEPKPDTG
GVSDEAEAPSDVAVGGASSHVNIGEEAVDPPPTSLNAAANSDVSADTLQPGNTTATSDTN
GVSDEAEAPSDVAVGGASSHVNIGEEAVDPPPTSVNAAANSDVSVDTLQPGNTTATSDTS
GVSDEAEARSDVAVGGASSHVDIGEEAVDPPPTSVNAAANSDVSVDTLQPGNTTATSDTS
GVSDEAEAPSDVAVGGASSHVNIGEEAVDPPPTSVNAAANSDVSVDTLQPGNTTATSDTS
GVSDEAEAPSDVAVGGASSHVDIGEEAVDPPPTSVNAAANSDVSVDTLQPGNTTATSDTS
GVSDEAEAPSDVAVGGASSHVDIGEEAVDPPPTSVNAAANSDVSVDTLQPGNTTATSDTS
GVSDEAEARSDVAVGGASSHVDIGEEAVDPPPTSVNAAANSDVSVDTLQPGNTTATSDSG
DEPRKEVANSENDISVALSTEEGNVKSIDIGAAGAVDSLTSDPADTEKRVTHVDVGEEAE
APSDVAVGGASSHVDIGEEVVDPPPTSVNAAANSDVSVDTLQPGNTTATSDSGDEPRKEV
ANSENDISVALSTEEENVKSIDIGAAGAVDSLTSDPADTEKGVTHDDAEESLVALRSELQ
KRSNELEQSEQRLLSTREKLSIAVAKGKGLIVNRDNLKQLLAETSAELQRCSEELSLKDT
KLKEVEVKLKTYTEAGERVEALESELSYIRNSATALRESFLLKDSLLHRIEEILEDLDLP
EHFHAQDILDKVEWLARSANGSSLRPSDWDQKGSDGGAGYVPSEPCREDGQTGTSSENNL
RIKFEELQGKFYGLAEHNEMLEQSLMHRNNLIQRWEALLGNIDMPLQLKSMEVENKIEWL
ASTISEAAHEKYTLQQKIDNLEVYCQSLTADLEVSQKQVSDVEANLRSVDHERISLSERF
ETLNGHQDNLSARATHLEVENEELKNQVKDLHGKLVEKLGNEEQLQTLEGDLLSLRDTIT
DVIEEDGLQDLAVASNSETLDVLLRKLIDYYKNLVKSSLPRERDDSFCETRSSNADVRSG
ESLGTHEATSHGHHPENIVEAASRDITVVESPDVASLTKDLDEALRVQKLVREERDLYME
KQQSLIAENEALDKKIIELQEFLKQEEQKSASAREKLNVAVRKGKALVQQRDSLKQTIEE
MNAEHGRLKSEVIKRDEMLLENEKKFRELESYTVRVEVLESECQLLRNHLQETENILQER
SDTLSMTLNALNHINIGDEGDRYDPVLKLQRISQLFQNMSTAVSSAEQESIKSRRAAELL
LAEVNEVQERNDSMQEELSKCTYEIEQLSREKDAAEAATVEAISRFENLSMVNIEEKKKL
CDQVLSVGTNVNSLRKIVAGTNSCLADIFTMNEEFLHHLKANMESCAKQTGTNLSGWPQG
SKGNFVDKEIFSRLSAALSNVNLHENSNAGNITEICGSLSRNLDQFVADVSHLEENVSKH
LASWQEQVNTVSTSIDTFFKSIGTGTDSEIAALGEKVSLLHGACSSVLAEIESRKAELVG
NDNFNMSLHQVEEDFSSMESVRAMVSRVSSAVKELVVANAETVERNEKEMKVIIANLQRE
LHEKDIQNDRMCNELVGQVKEAQAGAKIFAEDLQSASARMHDMQDQLSILVRERDSLKRR
VKELQEGQASQSELQEKVTSLSNLLAAKDQEIEALMQALDEEESQMEDLKHRVTELEQEV
QQKNLDLQKAEASRGKISKKLSITVDKFDELHQLSENLLAEIEKLQQQVQDRDTEVSFLR
QEVTRCTNEALVASQKDTKRDSEEIEAVLSWFNTIASLIGLEDSPSTDAQSHVNLYMEPL
EKRIASMLSEMEELRLVGQSKDSLLEAERSRVAELRQKEAALERILHEKESQPNMSTSEI
VEVEPLINKRTTSGASIPSQVRSLRKGNNDQVAISIDADQPDESLSLEDDDDKAHGFRSL
TTSRVVPRFTRPVTNMIDGLWVSCDRTLMRQPALRLGIMIYWAILHALLASFVV
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaagaatcgtgctgatccactcgctgctgggcgacagaagcttcaacag
tttcgtcaaaagaaggctgacaaaagcactgatcataaaaaggaccccaagggcagtaca
agccaaggaaaatcctccaaaaaatctggtaagaagcatgagcctaaacctgacactggt
ggtgtcagtgacgaggcagaagctccgtctgatgtggctgtaggaggagcttcatctcat
gtgaatattggtgaggaggctgttgatcctccaccgacttctctaaatgcagcagctaac
agtgatgtttcagctgacacgcttcagccaggaaacaccacagcaacttctgacactaat
ggtgtcagtgacgaggcagaagctccgtctgatgtggctgtaggaggagcttcatctcat
gtgaatattggtgaggaggctgttgatcctccaccgacttctgtaaatgcagcagctaac
agtgatgtttcagttgacacgcttcagccaggaaacaccacagcaacctctgacactagt
ggtgtcagtgatgaggcagaagctcggtctgatgtggctgtaggaggagcttcatctcat
gtggatattggtgaggaggctgttgatcctccaccgacttctgtaaatgcagcagctaac
agtgatgtttcagttgacacgcttcagccaggaaacaccacagcaacttctgacactagt
ggtgtcagtgacgaggcagaagctccgtctgatgtggctgtaggaggagcttcatctcat
gtgaatattggtgaggaggctgttgatcctccaccgacttctgtaaatgcagcagctaac
agtgatgtttcagttgacacgcttcagccaggaaacaccacagcaacttctgacactagt
ggtgtcagtgacgaggcagaagctccgtctgatgtggctgtaggaggagcttcatctcat
gtggatattggtgaggaggctgttgatcctccaccgacttctgtaaatgcagcagctaac
agtgatgtttcagttgacacgcttcagccaggaaacaccacagcaacttctgacactagt
ggtgtcagtgacgaggcagaagctccgtctgatgtggctgtaggaggagcttcatctcat
gtggatattggtgaggaggctgttgatcctccaccgacttctgtaaatgcagcagctaac
agtgatgtttcagttgacacgcttcagccaggaaacaccacagcaacctctgacactagt
ggtgtcagtgatgaggcagaagctcggtctgatgtggctgtaggaggagcttcatctcat
gtggatattggtgaggaggctgttgatcctccaccgacttctgtaaatgcagcagctaac
agtgatgtttcagttgacacgcttcagccaggaaacaccacagcaacttctgatagtgga
gatgaaccgagaaaagaagtagcgaattccgaaaatgatatcagcgtagcattgtccacg
gaagaagggaatgtgaagagtatcgacattggagcggctggcgcagtagattctttgacg
tctgaccctgcagataccgagaagagagttactcatgtggatgttggtgaggaggcagaa
gctccgtctgatgtggctgtaggaggagcttcatctcatgtggatattggtgaggaggtt
gttgatcctccaccgacttctgtaaatgcagcagctaacagtgatgtttcagttgacacg
cttcagccaggaaacaccacagcaacttctgatagtggagatgaaccgagaaaagaagta
gcaaattccgaaaatgatatcagcgtagcattgtccacggaagaagagaatgtgaagagt
atcgacattggagcggctggcgcagtagattctttgacgtctgaccctgcagataccgag
aagggagttacacatgacgatgcagaggagtcccttgtggccctacgatctgagttacaa
aagagatctaatgaacttgaacaatcagaacagaggttattatctactagagagaagctt
agcatagctgttgcaaaaggaaaaggtctgattgttaaccgtgacaatctcaagcagttg
ttggccgaaacctctgctgaacttcagaggtgctcagaggaactgagtttgaaggacaca
aagcttaaggaagtagaagtaaagcttaagacttatacagaggcaggtgaacgtgtggag
gctttagaatctgagctttcttacatccgaaactcagctactgcacttcgagaatccttt
cttctcaaagactctctgcttcacagaattgaagaaattttggaagatttggatctccca
gagcattttcatgctcaagatatactcgacaaggtggagtggctagcaagatcagctaac
ggcagctctttacgcccctctgattgggatcagaagggttctgatggaggtgctggatat
gttccctctgaaccctgcagggaggatggtcaaactggcacaagttctgagaataactta
aggatcaaattcgaggaactccaagggaagttttatggattggctgaacataatgaaatg
ctggagcagtccttgatgcacaggaataatttaattcagagatgggaagcgctcctaggg
aatattgatatgcctctacagctgaagtccatggaagtggaaaacaagatcgagtggctt
gcaagtacaatatcagaggctgcacatgagaagtatactctccagcagaagattgataac
cttgaagtctattgtcaatcactaactgctgatttggaagtctcacaaaagcaagtaagt
gacgtcgaggcaaatcttcgatctgttgatcatgagaggataagtctttctgaaagattt
gaaactctgaatgggcatcaagataatctttctgcgagggccactcaccttgaagttgag
aatgaggaactgaagaatcaagttaaagatctgcatggaaaattggttgagaaacttggg
aatgaagaacaacttcagactcttgaaggagacctattgagtttgagagacacgattact
gatgttatagaggaagatggcttgcaggatttggctgtagcaagtaattctgagaccttg
gatgtacttctgagaaagctgatagactattataagaacttggttaaatctagtttgcca
cgtgaaagagatgatagcttctgtgaaactcgttcatcaaatgctgatgttagaagcgga
gagtcattgggtacacatgaagcaacttctcatgggcaccatcctgaaaatatagtcgaa
gcagcaagtagagacataacagtggtagagtcgcctgatgtagcttccctaacaaaagat
ctggatgaagcactgcgtgttcagaagctggtgagggaagaaagggatttgtacatggaa
aaacagcaatccttgattgctgaaaatgaggcacttgataagaaaatcatagaactgcag
gagttccttaaacaagaagagcagaagtcagcttctgcaagagagaagttaaacgtagct
gtcaggaaagggaaagctttggtccaacaaagggatagcctgaaacaaactattgaggag
atgaacgctgagcatggtcgcctaaaatcagaggttatcaaacgagacgaaatgcttttg
gaaaatgaaaagaaatttagggagttggaatcttacactgtgagggtagaagtcctagag
tccgagtgccaattgttgagaaatcatttgcaagaaacagaaaatattctgcaggaaaga
agtgatacgttgagcatgacgttgaacgcgttgaatcacattaatattggtgatgaaggt
gacagatatgaccctgttctgaagcttcaacggatctcgcaactgtttcagaatatgagt
actgctgtgtcttctgctgagcaggaatcaataaaatctagaagagcagctgagttacta
cttgctgaggtgaacgaggttcaagagagaaacgatagtatgcaagaggagctatcaaaa
tgtacctatgaaattgagcaactttccagagagaaggatgcagcggaggctgcaacagtt
gaagccatatcacgttttgaaaatttgtcaatggtcaacattgaagaaaagaagaagcta
tgtgatcaggtgttgtccgttggaactaatgtgaacagtctgaggaaaatagtcgcaggt
acaaacagttgcctagctgatatcttcaccatgaatgaagagtttctgcatcatctgaag
gcaaatatggaatcatgtgcaaagcaaactggtactaatttgtctggctggcctcaaggt
agcaaagggaattttgtagacaaggaaatcttttcacgcttgagtgctgccttgtccaac
gtcaacttgcatgaaaattcaaatgctggaaacattacggaaatttgtggttctctctcg
cgaaaccttgatcagtttgtggcagatgttagccatctcgaagagaatgtaagcaagcac
ttggcatcatggcaagaacaggtcaacactgtatccaccagtattgatacctttttcaag
tcaataggaacaggaacagactcagaaattgctgctttgggtgaaaaagtttccttgctt
catggagcatgttccagcgtgttggcggaaattgaaagccgtaaggccgaactggttgga
aacgacaatttcaacatgagcctccatcaagtagaagaggatttttcgtccatggagtct
gtcagggccatggtaagtagggtatcatcagccgttaaagagcttgttgtagcaaatgct
gagactgtggaaagaaatgaaaaggagatgaaggttatcattgccaatttgcaaagggag
ctgcacgaaaaggacatccaaaatgacaggatgtgcaatgaacttgtgggtcaagttaag
gaagcccaggccggtgctaaaatctttgcagaagatcttcaatctgcaagtgcccggatg
catgatatgcaagaccagctgagtattttggtgcgggaacgggattctttgaagaggaga
gtaaaggagctgcaagaagggcaggcctcacagtcagagttacaggagaaggtcacatcg
cttagcaaccttcttgctgcaaaagaccaagaaatcgaggcattaatgcaagcgcttgac
gaggaagagtctcagatggaggatctgaaacacagggttactgaattagaacaggaagtg
caacagaagaacctggatctgcagaaagctgaagcttctcgtgggaagatttccaaaaag
ctatcaattactgtggataagttcgatgagctccatcaactctctgaaaatctacttgct
gaaatcgagaaacttcaacaacaagtgcaagatcgggataccgaggtttctttcttaaga
caagaagtcactaggtgcactaacgaggctcttgttgcttcgcagaaggacactaagaga
gattccgaagagatcgaagctgtactgtcttggttcaacacaatagcttcactaattggt
ctagaagattcaccttccaccgatgctcagagtcacgtaaacctctacatggagccactt
gaaaaaaggatagcgtctatgctatctgaaatggaagagttacggctggtgggacaaagc
aaggattcgttgcttgaagcagagaggagtagagtggctgagctcagacagaaagaagca
gctcttgagagaatactacatgagaaggaatcgcaaccaaacatgtcaacgtccgagatc
gttgaagtggaacctctgataaataagcggacgacaagtggagcatcgatcccatctcaa
gttcggagtttgcgtaaaggaaacaacgatcaagtcgccattagtatagatgcagatcaa
cctgatgaaagcctgagcttagaagatgacgatgataaagctcatggatttagatcgctc
accacgtcaagagtcgttccaagattcacaagaccagtgacaaacatgatcgatggttta
tgggtatcgtgtgaccggacgcttatgagacaacctgcattacggttagggataatgata
tactgggccatactgcatgctcttttggctagtttcgtcgtctaa
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integrated database retrieval system
