Brassica napus (rape): 106373976
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Entry
106373976 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 5
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106373976
00071 Fatty acid degradation
106373976
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106373976
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106373976
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106373976
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106373976
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106373976
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106373976
Exosomal proteins of breast cancer cells
106373976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106373976
NCBI-ProteinID:
XP_013669542
LinkDB
All DBs
Position
C9:complement(29720209..29727893)
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AA seq
666 aa
AA seq
DB search
MTSQKRFIIEVEAAKEATDGKPSIGPVYRSTFAKDGFPNPIDGIDSCWDIFRTAVEKYPN
NRMLGRREIVNNKAGKYEWKTYKEVYDIVLKLGNSLRSCGIEEGGKCGIYGANCPEWIIS
MEACNAHGLYCVPFYDTLGSGAVEFIISHAEVSIAFVEEKKIPELFKTCPNSTKYMKTVV
SFGGVKSEQKEEAEKLGLVIHAWDEFLKLGEGKQYDLPVKKKSDICTIMYTSGTTGDPKG
VLMSNESIVTITAGVRHFLAIFNESLTEKDVYISYLPLAHVFDRAVEECIIQVGGSIGFW
RGDVKLLIEDLGELKPSIFCAVPRVLERVYTGLQQKLSVGGFFKKKVFNVAFSYKFGNMK
KGQSHVEAAPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESFLRVVACCHVLQGYGL
TESCAGTFVTFPDELDMLGTVGPPVPNVDIRLESVPDMEYDALGSIPRGEICIRGKTLFS
GYHKREDLTKEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLAQGEYVAVENLENVYG
QVEAIDSIWVYGNSFESFLIAVANPSQQTLERWAAENGVNGDFDSICQNTKARAFLLGEL
VKTAKERKLKGFEIIRAVHLEPVAFDIERDLLTPTYKKKRPQLLKYYQNVIDDMYKTAKE
GQASVQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccagaagagattcatcatcgaggtggaagctgctaaggaagctaccgatgga
aaaccctccattggtcctgtctatcgcagtactttcgccaaagacggtttccctaaccca
atcgacgggatcgacagctgttgggatattttccgcacggctgttgagaaatatccaaac
aatcgcatgcttggtcgacgtgagattgtgaacaacaaggcaggaaagtatgagtggaag
acatacaaagaagtatatgacattgtcctaaaacttggaaactctctccgtagctgcggg
attgaggagggaggaaaatgtggtatttatggtgcaaactgtcctgagtggatcataagc
atggaggcatgcaatgcacatgggctctattgtgttcctttttacgatactttaggctct
ggtgccgtggagtttattatttcccatgcagaagtttccattgcttttgtagaggagaaa
aagattcctgagctttttaagacatgtccaaactccacaaagtatatgaaaactgttgtg
agctttggcggtgtcaaatcggaacagaaagaagaagctgaaaagttaggactggtaata
catgcttgggatgagttcttgaagctgggtgaaggtaagcaatatgatcttcctgttaaa
aagaaaagcgacatttgcacaattatgtatactagcggaaccactggtgacccaaaggga
gttctgatgtcaaatgagagcattgttaccataacagctggggtgaggcatttcctagcg
atttttaacgaatcccttactgagaaagatgtctacatatcttatcttcctcttgcgcac
gtctttgaccgggctgtggaggagtgcatcattcaagttggtggttcaatcggtttctgg
cgcggggatgttaagttgttgattgaagaccttggtgagctaaagccaagtattttctgc
gctgttcctcgtgtcctagaacgagtatacacaggtctgcagcaaaaactatccgttggt
ggtttcttcaaaaagaaagttttcaatgttgctttctcctataaattcggaaatatgaag
aaggggcagtctcatgtcgaagcagctccattctgtgacaaacttgtcttcaacaaggtt
aaacaaggactgggaggcaatgtgaggattattctatctggagcagctcctcttgctagt
cacatagagtcatttcttagagttgtggcatgttgtcatgttctacaaggatatggtcta
actgagagctgtgctggtacttttgttaccttccctgacgaacttgacatgcttggaact
gttggtccaccagtgccaaacgtggatattcgcctagaatctgtccctgacatggaatac
gatgctcttggaagtattccacgaggcgaaatctgcatccgtgggaaaactctgttttct
ggataccacaaacgtgaagacctcaccaaagaggttcttattgatggatggtttcacaca
ggtgatattggtgagtggcagccagatggaagcatgaagataattgaccggaaaaagaac
atcttcaaactcgcgcaaggggagtacgttgcagttgagaatttagaaaatgtgtacggt
caagtagaagccattgattcaatatgggtgtatgggaacagctttgagtccttccttata
gcagtcgctaacccaagtcagcaaactcttgaacgctgggccgcggagaatggagtgaat
ggagacttcgactctatatgtcaaaacacaaaagcaagagcattcctacttggagaactc
gttaagacagccaaagagagaaagttgaagggttttgagatcattagagctgttcatttg
gaacctgtggctttcgacattgaaagagaccttcttactcctacctacaagaagaagagg
cctcaattactcaaatactatcagaatgtgattgatgatatgtacaagactgcaaaggaa
ggtcaagcttcagtacagtag
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