Brassica napus (rape): 106374185
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Entry
106374185 CDS
T04128
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106374185
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Other 90S particles
106374185
Pre-60S particles
Other pre-60S particles
106374185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WDR55
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_WDR41
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR35_TULP_N
WDR54
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
106374185
NCBI-ProteinID:
XP_022549891
LinkDB
All DBs
Position
C1:complement(1882805..1885755)
Genome browser
AA seq
472 aa
AA seq
DB search
MDTNVMFRMVSSVSWIPKGAAKVMLDAAEPPSNEKIRELIKNGTLKKSTLRDEEVAHAKA
VAKSLGKSCSKSNVASSSSSTDPDEVVKFMKELDMDNYDDEDDDDDEIDVFTSGRGDLYY
PSNDMDPYLNNNTDDDYYDSDDVDAITIKPSDSLIICARVEGEINYLEVYKYDGTWNGTQ
DMYPRQDIILSNPPLCTAWLDCPLKGGDKRNFVAIGFKGSPTIEIWDLDVAHEVLPCVQL
GAGQTSDCDTDQSVIDLAWNKEFRNIIASASANKKVKVWDVATGQCKLTLEHHTKEVQAV
EWNHYAPQVLLSGSYDCTVVLKDGRDPSHSGMKWSTNAKVESLAWDPHSEHSFVVSLEDG
TVKGFDIRASDLSPSFTIHAHDKEVSSISYNTNAPNLLATGSRDKSVKLWDLSNNQPSWV
ATHKPNAGRVFSVSFSADCPFLLAIGAKKGKLHVWDTLSDTAVSRRYGSNRP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggataccaacgttatgtttagaatggtaagttcagtttcatggatacctaaaggagca
gcaaaagtcatgcttgacgctgctgaacctccttctaatgagaagatcagagagctcatc
aaaaatggcactctcaagaaaagtactctgagagatgaagaagttgctcatgccaaggct
gtagcaaaatctttaggaaaatcatgttccaaaagcaacgttgcttcttcttcttcttca
actgatcctgatgaggtagtcaagttcatgaaagaactcgacatggataactatgatgat
gaggatgatgatgatgatgagattgatgtgtttacctctggccgcggagacctttattac
ccaagcaatgacatggatccatatctgaacaataatactgacgatgattactatgactca
gacgatgtcgatgctataacaataaagccaagtgattcactgatcatctgcgctagagtt
gaaggtgaaatcaactatctcgaggtttataaatacgacggtacatggaacggcactcaa
gacatgtatcctcggcaagacataatactatccaaccctccattgtgtacagcatggctt
gattgtcctctcaaaggaggagataaaaggaactttgtagctatcgggtttaagggatca
ccgaccatagagatatgggatcttgacgttgctcatgaggttctaccttgtgtacaacta
ggagccgggcagacatcagattgtgacactgatcaatcagtaattgatcttgcttggaac
aaggagtttaggaatattattgctagtgccagtgccaacaaaaaagttaaggtctgggat
gtggctacaggacaatgcaagctcactctggagcatcacacaaaagaggttcaagcggtc
gagtggaaccactatgctccacaagtactcctcagtggctcatatgactgtactgtagtc
ttgaaagatggaagggacccttcgcactcgggtatgaaatggtctaccaatgccaaagtg
gaaagcttggcctgggatcctcatagtgaacactcttttgtggtgagtcttgaagatgga
actgtgaagggttttgatatacgtgcttctgatttatcaccaagtttcactatccatgct
catgataaagaagtctcatccatctcatacaacacaaatgcgcccaatcttttggctacg
ggatctagggacaagagtgtgaaactttgggatctttcaaacaatcaaccatcatgggtt
gctacacataaaccaaacgctggaagagttttctcagtctcattctctgcggactgcccc
tttttactcgctattggtgccaaaaaagggaagctacacgtgtgggatacactatctgac
actgctgtgtcccgtagatacggtagcaaccgaccatga
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