Brassica napus (rape): 106374408
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Entry
106374408 CDS
T04128
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106374408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106374408
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106374408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_16
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
106374408
NCBI-ProteinID:
XP_048610941
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Position
C4:complement(56537331..56541450)
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AA seq
799 aa
AA seq
DB search
MVGTDQSLPFSTARNLPWILRSESKRISQSELAKRPDPFFLPDLLDGFEESKYGWLADDV
KRLCELKRKLLNGSVSVEETETRQKKEKPDDVLSQESVTIGGCSGSESYNEEDSSKTPTD
DDNGTHLYGVGEEEEEAELWRQMAFAQESSKVTVENVQDNDPKQIEDCEHSFIYKDDVGE
VCRVCGLIKTPIESIIEVVYYKPKRSRRTYTREQEEDTETTRMDFTETHHSSSHPNNILG
DKMFIHPRHDNEMRPHQIEGFKFLCNNLASNEPGGCILAHAPGSGKTFLLISFLQSFMAM
DPQAKPLIVLPKGIIESWKREFTKWAVEDIPLYDLYSVKAESRRQQLKVLREWVEERSIL
FLGYQQFAKIICDDSINIDDEVSEDCKRILLEKPTLLILDEGHTSRNKETNLLISLARVK
TRRKVVLTGTLFQNNVEEVFNILNLVRPKFLKRHREIVSRIMSKAEIPSGKHMNQSSIEN
TFFAAVELTLSRESSAKASMIKDLREMTRHVLHYHKADFKGLLPGLSEFTVMLNLSPLQR
DEIKGLREMDLFKQISLGAALYIHPKLKAFLEANPSNGEKGFADNLLKKLDTLLKKINVK
DGAKMKFFLNLVSLCESTGEKLLVFSHYIIPLKTLERLMTLTKRWRVGKEMFTITGDSSS
GEREMSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRP
GQKRRVYAYRLVAADSPEEESYETCSRKEMMSKMWFEWNVGCGGGRDEFGFRGVDVDQSG
DVFLETTKMKEDIKSLYTR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtactgatcagtctctaccattctcaacggcgaggaacttgccttggattttg
aggtcggagagcaagaggattagccagtcagaactcgccaagcgtcctgacccgttcttt
ctaccggatctacttgatgggtttgaagagagcaaatacggttggcttgctgatgatgtg
aagaggctttgtgagctcaaaaggaaactcttgaacggttctgtctcagtggaagagaca
gaaactagacagaagaaggaaaaaccagatgatgtgttgtctcaagaatcagtaactatt
ggaggttgctcaggatctgaaagttataacgaggaggattcatccaagactcctacagat
gatgacaatggaactcatctgtatggagtaggagaagaagaagaagaagcagaactttgg
aggcagatggcatttgctcaagaatcatctaaagtaacggtagagaatgtacaagacaac
gatcccaaacaaatcgaagactgcgagcactccttcatctacaaggatgacgttggagaa
gtctgccgtgtttgtggactcatcaaaacaccaatcgaaagcatcatcgaagttgtctac
tacaagcccaagagatcaagaagaacttacacacgcgaacaagaagaagacacagaaaca
acgaggatggacttcacagaaacccaccactcttcttctcatcccaacaacatcttagga
gacaagatgttcatccacccaaggcacgacaacgagatgagaccccaccaaatcgaaggc
ttcaagttcctatgcaacaacctcgcatcaaacgagccaggcggatgcatcctagcacac
gcgccgggctcaggcaaaacattcctcctcatcagcttcctccaaagcttcatggccatg
gatccgcaagccaaaccgctcatagtcctcccaaagggtatcatagagtcttggaagaga
gagttcactaaatgggcggtggaggacatccctctctatgatctctacagcgtcaaagcc
gaatcaagaagacaacaactaaaggtgttgagagaatgggttgaagagagaagcatactc
tttctcggttaccaacagttcgcaaagatcatatgcgatgatagcattaacatagatgat
gaagtgtcagaagattgtaaacgtattctcctcgagaagccgacgctgcttatcctcgac
gaaggacacacgtcgaggaataaggagacgaacttgcttatctcccttgcacgcgtcaag
actcgtaggaaagtggttctcacggggacattgtttcagaacaacgttgaggaagtgttt
aacattttaaacctagtccgtcccaagttcttgaagcgtcaccgagagattgtttctcgc
atcatgagcaaggcggagatacctagcggcaaacatatgaaccagagtagtattgaaaac
actttcttcgctgcggtggagcttacactgagtagagagagttcagctaaagcgagtatg
attaaggatctgcgcgagatgacacgtcacgtcttgcattatcacaaagcggacttcaag
ggattgcttccagggcttagtgagttcactgtgatgctcaacttgagcccgcttcagaga
gatgaaatcaaaggccttagggagatggatttgttcaagcagatctctctcggtgctgct
ttgtacatacacccgaagcttaaagccttcttggaggcaaacccttcgaacggagaaaaa
ggtttcgctgataacttgctgaagaagctagataccttgctgaagaagattaacgttaaa
gacggcgccaagatgaagttcttcctcaaccttgtgtctctctgcgagtcaacgggtgag
aagctgttggtgttcagccattacatcatccctctcaagactctcgagaggctcatgacc
ctgacgaaaagatggagggtggggaaagagatgttcaccatcacaggcgactcgagcagc
ggggagagagagatgtccatggagaggttcaacacctctccggacgctagagtgtttttc
ggatcgatcaaagcatgtggagaagggatctcattggtgggtgcgtctagggtgctgatt
ctcgacgttcatctaaacccttcggtgactcagcaggctgtggctagagcttataggccg
gggcagaagaggagagtgtatgcgtacaggcttgtggctgcggattcgccggaggaggag
agctatgagacgtgttcgaggaaggagatgatgtctaagatgtggtttgagtggaacgtt
gggtgtggaggagggagagatgagtttgggtttaggggcgtggatgttgatcagtctggt
gatgtgtttcttgagacgactaagatgaaagaagatatcaagagtttatatactaggtga
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