Brassica napus (rape): 106374421
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Entry
106374421 CDS
T04128
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 4-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106374421
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106374421
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106374421
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106374421
2.5.1.29 geranylgeranyl diphosphate synthase
106374421
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106374421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
106374421
NCBI-ProteinID:
XP_048625851
LinkDB
All DBs
Position
C9:complement(9198950..9201748)
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AA seq
369 aa
AA seq
DB search
MEAQTTILYLLLFLSLNFVFQTLKQRLSPANTRRLTRFLHLPFKHPAAAAVFARQDVHEF
LDTSTQVENNEDDSEFDFKPYMKTKAESINRALDKAIPLVEPLNIHKAMRYAILAGGKRV
RPILCLAACELVGGEERSAVPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGE
SVAILSGGALLALAFEHLTEADVSPERMVRAVKELAKSIGTKGLVAGQAMDLSSEGLDQN
DVGLKELEFIHVHKTGSLLEASAVIGAVIGGGSEEEVEKVRRFARCIGLLFQVVDDILDG
TKSSEELGKTAGKDQVAGKLTYPKVLGLEESKEFVKRLKKEAREHLKGFDSDKAKPLVAL
ADFIANRNN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcaaactaccattctctatctcttactcttcctatctctaaacttcgtgttt
caaactctaaaacaacggctgagtccggcaaatacgcggcgactaacccgtttcctccac
ctcccgttcaagcatcccgccgcagccgccgttttcgccagacaagatgtccatgagttt
ctcgatacatcaacccaagtagagaacaacgaagacgattccgagttcgacttcaaacct
tacatgaaaaccaaagcagagtcaataaacagagcgctagacaaagccatcccactcgtc
gagcctctcaacatccacaaggcaatgcgctacgcgatcctcgccggcggcaaacgcgtc
agaccaatactctgcctcgcggcctgcgagctagtcggaggggaagagcgttcggcggtt
ccggcggcttgcgcggtcgagatgattcacacgatgtcactcatcaaagacgatcttcct
tgcatggacaacgacgacctccggcgaggtaagcccacgacgcacaaagtcttcggagaa
agcgtcgcgattctctccggcggcgcgctcctagctctggccttcgagcatttgacggaa
gctgacgtgtcgcctgagagaatggttagagcggttaaagaactggcgaagtctataggg
acgaaagggctcgtggcgggacaagcgatggatttgagcagcgaaggtttggatcaaaac
gacgtcgggttgaaggagcttgagtttattcacgttcataaaaccggttcgctgcttgag
gcttcggcggttatcggagcggttattggaggtggttcggaggaagaggttgagaaggtg
aggaggttcgcgaggtgtattgggttgttgtttcaggtggttgatgatattttggatggg
actaagtcgtcggaggagctggggaagaccgccgggaaagatcaggtggccggaaagctg
acgtatccgaaagtgttgggacttgaggaaagtaaagagtttgttaagaggctgaagaaa
gaggcgagggaacatcttaaagggtttgattcagacaaagccaaacccttggtagctctt
gctgacttcattgccaacagaaataactga
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