Brassica napus (rape): 106374621
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Entry
106374621 CDS
T04128
Name
(RefSeq) protein argonaute 9-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106374621
03036 Chromosome and associated proteins [BR:
bna03036
]
106374621
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106374621
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106374621
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106374621
microRNA pathway
RISC loading complex
106374621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
106374621
NCBI-ProteinID:
XP_013670063
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All DBs
Position
C9:53458158..53463249
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AA seq
886 aa
AA seq
DB search
MDPNRSGHLQMARSGNGSRGQKIDLLTNHFGVNFTSKSQHFFQYSVAITYEDGNPVEAKG
IGRKILAKVQETYQTDLGSKHFAYDGDKTLFTVGPLPNNKLDFSVVLEDMSCTRSNTSTS
DANTKRLRPHNQSKRFNVAISFAAKISMQAIQGALQGKETNDLQDAVRVLDVILRQNAAT
KGCLLVRQSFFHNDAKYFSNNHGGFHLCRGFHSSFRATQGGLSLNIDVSSTLIVSPGPVI
DFLTLNQEVRGPSSIDWKKAERTLKNLRVKVYPSNREYKITGLTRLPCRDQTFLWKQKQG
NGETKEVEVTVYDYFTKHLEITMRHSGGLPCISVGKPKRPTYFPIEQCHLVSLQRYTKAP
TIFQRSKLVKESVQKPQEKMNVLNNAIKDSGYNNDPMFQDCGVSIGSNFTQVEGRVLPTP
RLKVGNGEEFQPRDGRWNFNYKKLVEPATVTRWVLVNFSARCDTKRLISDLIGCGRMKGI
NVEPPYKVVFQEDPDYRGAPANIRVQKMFEQMQSELRKEGIEGKPKFILCILAEKKNSLV
YGPWKRRNLVEEGIVTQCIAPTPKINDQYLTNVLLKINAKLGGLNSLLAMERSPRAMMPL
VTQVYTFIVGMDVSHGSPGQSDIPSVAAVVGSREWPLISKYRACVRTQSRNTEMIDNLFK
PVTDENGKLVDEGIFWELLFDFYTSSGNRRPEHIIIFRDGVSESQFNQVLNIELDQMMKA
CKFVEENWEPKFTVIIAQKNHHTKFFQAESPGNVPPDNVPPGTIVDSKICHPRNNDFYLC
AHNGMIGTTRPTYYHVLYNEIGFSTDDLQELVHSLSYVYQRSTTAISVVAPIMYAHLAAA
QMATAMKFEDNSETSSSHGGITTSEAVPVSPMPKLKVDVASSMFFC
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaacaggagtggtcatcttcaaatggctcggagtggtaacggttctagagga
cagaagatcgatctgcttactaaccactttggagtcaacttcacatcaaaaagtcaacat
ttcttccaatacagtgtcgctatcacatatgaagatgggaatccagttgaagccaagggt
attggcagaaagattcttgcaaaagttcaagaaacttatcaaactgatttgggttccaaa
cactttgcttatgatggcgacaagactcttttcactgttggtcctcttcccaacaacaaa
ctagacttctctgtcgttcttgaagacatgtcttgtaccagaagcaacaccagtaccagt
gacgccaacacgaaaagattaaggcctcataatcaatccaaaagattcaatgttgcaatc
agctttgctgcaaaaatctcaatgcaagctattcaaggtgctcttcaaggaaaggaaaca
aatgatcttcaagatgctgtaagagtgttggatgttatcctgcgccagaatgcagctaca
aaaggttgtcttcttgttcgtcaatctttcttccacaatgacgcaaaatacttttcaaac
aaccatggaggttttcatctatgcagaggattccattcaagcttcagagctactcaggga
ggcttatccctcaacattgatgtttcttctacattgatagtatcacctggtcctgttatt
gatttccttactttaaatcaagaagtgagaggtccatcctctatcgactggaaaaaggct
gaacgtactctcaagaatcttagagttaaagtctacccctcgaatcgagaatacaagata
accggactaactagacttccttgcagagaccaaacgtttctttggaagcaaaagcaagga
aacggggaaactaaggaggttgaggttacagtgtatgattacttcactaaacatcttgaa
attacaatgcgtcattcaggtggcttaccttgcatcagtgttggtaagccaaaacgtcct
acttactttcccattgagcaatgtcatcttgtttctcttcaacgctatacgaaagctcct
acaatttttcagaggagtaaacttgtcaaagaatcagtacagaaaccacaagaaaagatg
aatgtgttaaacaacgctattaaggacagtggttataataatgaccctatgttccaagac
tgtggtgtcagcattggctcaaacttcactcaagtggaaggccgcgtcttaccaacacca
aggctgaaagtaggcaatggagaggagtttcaacctcgcgatgggcgttggaacttcaat
tataagaaacttgttgagccagctactgttactagatgggttcttgtgaacttctctgct
cggtgtgatacaaaaaggcttatttctgacttgattggatgtggaaggatgaaaggaatc
aacgtagaacctccatacaaagtcgtatttcaagaagatcctgattataggggtgcacca
gccaacatcagagtacaaaagatgttcgagcagatgcaatctgaactcagaaaagaagga
atagaaggaaagccaaaattcattctttgcattcttgccgaaaagaaaaactctcttgtt
tatgggccttggaagaggagaaatcttgttgaagaaggaattgtgacgcagtgtattgct
cctacccccaaaataaatgatcagtatctcacaaatgttctcctcaagataaatgccaag
cttggtggactgaactccctgttagctatggagcgctcaccccgagcaatgatgccttta
gtaacgcaagtttataccttcattgttgggatggatgtatcccatggttcccctggacag
tctgacataccatcagttgctgctgttgtgggatccagagaatggccactcatctcaaaa
tatagggcatgtgtgcgcacacaatctcggaacacggaaatgattgataatctcttcaaa
cctgtcacagacgagaatggaaaactcgttgatgaaggaattttctgggagctcttgttc
gacttttacacaagctcggggaataggagacctgaacacattatcattttcagggatggt
gtgagtgagtctcagttcaatcaagttcttaacattgaattggatcagatgatgaaggca
tgcaaatttgttgaagaaaattgggaacccaagttcacagtgatcattgcccaaaagaac
caccacaccaagttcttccaggctgaaagccctggcaatgttccaccagataatgttcct
ccaggaacaatagttgacagcaagatctgtcacccacgcaacaatgacttctatctctgt
gcccataatggaatgattggaactacaaggccaacatattaccatgtgctctataatgag
attggattttcgacagatgacctccaagaacttgttcattctctatcctatgtctaccag
cggagcacaactgccatctctgtagttgcgcctataatgtatgctcatttggcagctgca
cagatggcaactgcgatgaagtttgaggacaactccgagacttcatcgagccatggtggg
attacaacatctgaagcagtacctgtctctcccatgccaaagctgaaggtggatgttgca
agctctatgttcttctgttga
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