Brassica napus (rape): 106375416
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Entry
106375416 CDS
T04128
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106375416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106375416
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106375416
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106375416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
RAG2
Motif
Other DBs
NCBI-GeneID:
106375416
NCBI-ProteinID:
XP_022551814
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All DBs
Position
C1:complement(3959263..3966740)
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AA seq
948 aa
AA seq
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MEKSSTLLVYYDKGTPAVAKEIKEALEGNDVEAKVDAMKKAVMLLLNGETIPQLFITIIR
YVLPSEDHTIQKLLLLYLELIEKTDSRGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLKETEIVEPLTPSVLQNLEHRHPFVRRIAILAIMSIYKLPNGDQLFVDAPEMIEKALS
TEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPTEK
GKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCLLLLSQSDNNVKLILL
DRLSELKSLHRDIMVELIIDVLRALSSPNLDIRKKTLDIALDLITHHNINEVVQMLKKEV
VKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVISFVR
EIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSFSEVESGISTITQCLGE
LPFYSVSEESEPTEASKKIQPTSSAMVSSRKPVILADGTYATQSAASETTFSSPTVVQGS
LASGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVTQALLIMVSMLQLG
QSPASPHPIDNDSYERIVLCIKLLCHKNDGMKKIWLESCRQSFVKMISEKQLREMAELKA
MAQTTNAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIALQVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLAP
GTNMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCTEVAF
RTMWAEFEWENKVAVNTTIQNERKFLDHIIKSTNMKCLTPPSAIEGECGFLSANLYAKSV
FGEDALVNVSIEKQTDGALSGYIRIRSKTQGIALSLGDKITLKQKGSS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatctagtacattgcttgtatactatgacaaagggactccagcagttgccaaa
gagattaaagaagctctcgaaggaaatgatgtggaagcgaaagttgatgccatgaagaag
gcggttatgcttctgctgaatggagaaaccatcccgcagcttttcataactattataaga
tacgtgctgccttctgaggaccacacaatccaaaagcttctgctgctgtacctggagctg
attgaaaagacggattctagggggaaggtcctacctgaaatgattttgatatgccagaat
cttcgtaataatctgcagcatccgaatgagtacattcgtggagtgacactgaggtttctt
tgccggttgaaggagactgaaattgttgagcctttgactccatcagtgttgcaaaatctg
gagcaccgccacccgtttgttcgtaggattgcaattctggccatcatgtcgatatataag
cttccaaatggcgaccaactcttcgttgatgcacctgaaatgatcgagaaagctctgtca
acagaacaagatccgtctgccaagagaaatgcatttctaatgctctttacctgtgctgaa
gaacgagctgtgaattatcttctgagcaatgttgacaaggtttcagactggaatgaatcg
cttcagatggtggtgctggagttgattcgaagtgtctgtaagactaaaccaacagagaag
gggaaatatattaagattattatttctctgttaagcgccacttcttctgcagttatctat
gaatgtgctgggactcttgtttctctctcgtctgcccctactgctattagagctgctgcc
aacacctactgtctacttcttctttctcagagtgacaacaatgtgaagcttattttactc
gatcggttgagtgagcttaagtcattgcacagagatatcatggttgagttgataatagat
gttctcagagcactctcaagcccgaaccttgatatccgcaagaagacacttgacattgcc
cttgacttgattactcatcacaatatcaatgaggtcgttcaaatgttgaagaaagaagtc
gtgaagacacagagtggagagcttgagaagaatggagagtacaggcaaatgcttattcaa
gcaattcatgcttgtgcagttaagttccctgaagttgcaagcacagtggtccatcttcta
atggatttcttgggagatagcaatgtggcttcagcacttgacgtgatttcatttgtccga
gagataatagaaacgaatcccaagttgagagtttcaattataaccaggttgctagacacg
ttctatcagatccgcgcaggaaaggtctgcccttgtgcactttggattattggggagtat
tgtctatcattttcggaagttgagagtggcatttccaccattacacaatgccttggggag
ttaccgttttactctgtttctgaggaatctgagccaactgaggcatcgaagaagattcag
ccaacttcttccgccatggtgtcctctagaaaacctgtgattcttgctgatggaacttac
gcaacccaaagcgcagcctctgaaaccacattctcctcaccaacagttgttcagggatca
ttggcttcaggaaatttgagagcgctgcttctaactggtgattttttccttggagcagtt
gttgcttgcacactgactaaacttgttcttaggttagaagaggttcagtcatctaaaact
gaagtgaacaagacagtcacacaggcgttgctgatcatggtttctatgttgcaacttggc
caatctcctgcttctccacaccctattgataatgattcatatgagaggattgtcttgtgc
ataaaattgctttgccataagaatgatgggatgaaaaagatatggctggaatcctgccgc
cagagttttgtcaagatgatttctgaaaaacagcttagagagatggctgaacttaaggca
atggcccaaacaactaatgcccaacctgatgatctcattgacttcttccatctgaagagc
cggaagggaatgagtcaacttgagctagaagaccaggtacaagatgacctaaagcgtgca
actggagaattcaccaaggacgagaacgatgcgaacaaactaaaccgcattcttcaactc
acaggattcagtgatccagtctatgctgaagcatatgtgaccgtccatcactatgacatc
gcactccaagttactgtcatcaaccgtacaaaggaaaccctacagaatctgtgcttggag
ttagcaaccatgggtgatctcaagctcgttgagcgtcctcaaaactatagtctggcaccg
ggaacgaacatgcagataaaagcaaacatcaaggtctcgtccacagagactggagtcata
ttcgggaatatcgtctatgagacatcaaatgtaatggagcgaaatgtcgtggtactcaac
gacatacacattgatatcatggactatatctcccctgctgtttgcacagaggttgctttt
agaaccatgtgggcagagttcgaatgggaaaacaaggttgctgtgaacaccacgattcaa
aacgaaagaaagttcctcgaccacataatcaaatccacaaacatgaagtgtctcactcct
ccatctgcaatagaaggagaatgcgggttcctatcggcaaacttatatgcaaaaagtgtg
tttggtgaggatgctcttgtgaatgtgagtatcgagaagcaaactgatggggcattgagt
ggctacataaggataaggagcaagacgcaagggattgctctaagtcttggagacaaaatc
accctcaaacaaaagggtagtagctga
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