Brassica napus (rape): 106375446
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Entry
106375446 CDS
T04128
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106375446
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106375446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106375446
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106375446
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
106375446
NCBI-ProteinID:
XP_013670810
UniProt:
A0A816R3X4
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Position
C1:4620152..4624459
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AA seq
726 aa
AA seq
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MELSKDKLLMLYSDKKEPKEAIWAVNDPMSKSYKLSLPSALKPPDNLLAGNRISRYTDNN
KSKSSKPSWYKTILDPGSEIVLKWNWVFIISCMLALFIDPLYFFVPAIGGNKDYPCAKTD
TNLRILVTFFRTIADLFYLLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYLKSD
FIIDLVATLPLPQIVIWFVMPATRSYRFDHSNNDLALIVLLQYIPRFYLIIPLSSQIVKA
TGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSFDRYTSCWKTRCNKEHGGVNCYLYYL
DCDSPLYDARQQQWANVTNVFKLCDARKGEFKYGMFENAITKKVVSSNFNERYFYCLWWG
LQQLSSYGQNLSTTTFIGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLKKR
DTEEWMRHRQLPEDLRDRVRRYEQYKWLAARGVDEEVLLQSLPTDLRRDIQRHLCLDLVR
RVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLITEMLFIIRGRLESSTTNGGRTG
FFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQF
RRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRAMENHLTAVESKQSDEEEEEEVV
VGKVVEEEEEGVGSSPKTKMNIGVMVLASRFAANTRRGVAAQRVKDVEMPRFKKPEEPDF
SAEPDD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagcaaggacaagcttcttatgttgtattcagataagaaagaacccaaagaa
gccatatgggcagtgaatgatccaatgtccaaatcatacaaactctctctaccttcagca
ctcaaacctcctgacaatctcttggctggaaacagaatcagtagatacactgacaacaac
aagtcaaaatcttccaaaccctcatggtacaaaaccattctcgacccagggagtgagatc
gtcttgaaatggaactgggtcttcatcatctcctgcatgctcgctctcttcatcgaccct
ctatacttcttcgtcccagccatcggtggaaacaaagactacccctgcgccaagaccgac
acgaacttaagaatcctcgtcaccttcttcagaaccattgcggatcttttctacctgctc
cacattttcatcaagttcaggacaggtttcatcgctccaaactcgagcactcgtgtgttc
ggtagaggcgagctcgtgatggatcccaaggctattgcttggaggtatcttaagtctgac
ttcatcatcgacctcgtcgctacgttgccgcttcctcagatagttatctggtttgttatg
ccggctacgagaagctaccggtttgatcatagcaacaatgatcttgcgttgattgtgctc
ttacagtacattcctaggttctatctgataatcccgttgagttctcagatagttaaagct
actggtgtggttacgaagactgcttgggctggagctgcttataatctcttgctatacatg
ctagctagtcatgtgcttggtgcggcgtggtatatactatcgtttgatagatacacgtca
tgctggaaaacgagatgcaacaaagaacatggtggagtcaactgttatctctattactta
gactgtgattcaccactctatgacgccaggcagcaacaatgggcaaatgtcacaaacgtg
tttaaactctgcgatgcacgaaagggagagtttaagtatgggatgttcgagaacgcaatc
actaaaaaggttgtgtcttcaaactttaacgagagatatttctactgcttgtggtggggg
ctgcaacagcttagttcttatggacagaatctgtcaacgaccacattcattggtgaaacc
acgtttgctgtgctcattgcaatctttggtcttgtcctctttgctcatctcattgggaat
atgcagacatatttgcaatctttgacggtacggcttgaggaatggagattgaagaagaga
gatacggaggagtggatgagacatcgccaacttcctgaagatttgagagaccgtgtgagg
cgatatgagcagtataagtggcttgcagcaagaggagttgacgaagaggttctcctacaa
agtttacccactgatcttcgccgtgatatccaacgtcacctatgcttagaccttgttaga
cgagttccatttttctcacaaatggatgatcagttgcttgacgccatatgcgagcgtctg
gtctcttctctgtgtacggaagggacttaccttgtccgtgaaggtgacttgatcacagag
atgctctttatcatcagaggtagactcgagagttccacaaccaatggaggcagaaccggt
ttcttcaactcgatcatactaagacctggagacttctgtggagaagagcttctttcgtgg
gctttgcttccaaaatcaaccttgaatctaccgtcttctacaagaacagttagggcctta
gttgaagttgaagcattcgctcttcgagctgaagatttgaagtttgttgccaatcagttt
aggaggctacacagcaagaagcttcaacatactttcagattctactctcaccattggagg
acttgggctgcttgcttcatacaagccgcttggcggaggtacaagagaagagctatggag
aatcatctcactgcggttgaatcaaagcaaagtgatgaagaagaagaagaagaagtagtg
gttggaaaagtagtagaagaagaggaagagggtgtagggtcgagtccaaagacgaagatg
aacattggagttatggttttggcttcacgttttgcagctaatacaagacgtggtgttgca
gctcagagagttaaggatgtggagatgcctcggttcaagaaacctgaagagcctgatttc
tctgctgagcctgatgattga
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