Brassica napus (rape): 106375521
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Entry
106375521 CDS
T04128
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106375521
03083 Polycomb repressive complex
106375521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106375521
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106375521
Histone modification proteins
HAT complexes
HATB complex
106375521
HDAC complexes
Sin3A-HDAC complex
106375521
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106375521
PRC2.2
106375521
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106375521
Heterochromatin formation proteins
Other heterochromatin formation proteins
106375521
Chromatin remodeling factors
NuRD complex
106375521
NuRF complex
106375521
NuRF complex (fruit fly)
106375521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_DCAF12
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Ice_binding
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106375521
NCBI-ProteinID:
XP_013670907
UniProt:
A0A816IWU9
LinkDB
All DBs
Position
C9:9690463..9693688
Genome browser
AA seq
504 aa
AA seq
DB search
MESDEAAAAAAASPQASGGTVTPAPKKRGRKPKSKDESQEQISGGKMKESGKKTKQEEQS
VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLYLSEQTDGSVPN
TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATH
TDSPDVLIWDVDTQPNRHAVLGAASSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKM
VVLWSIQDHITTVGTDSKSSGSIIKQTGEGGDKTESPSVGPRGVYQGHDDTVEDVAFSPT
SAQEFCSVGDDSCLILWDARTGTSPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVR
LYDRRSLTSNGVGTPIYKFEGHKAAVLCVQWSPDKASVFGSSAEDGLLNIWDYDRVSKKS
DRAAKNPAGLFFQHAGHRDKVVDFHWNAADPWTIVSVSDDCETTGGGGTLQIWRMSDLIY
RPEEEVLTELEKFKSHVMTCASKP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcagcagcagcagcagcagcgtctcctcaagcgagcggaggaacc
gtaacaccggcgccgaagaagagaggccggaaacctaagagcaaagacgaatctcaggag
cagataagcggtgggaagatgaaggagagcgggaagaagacgaagcaggaggagcagagt
gtggacgagaagtactctcagtggaaaggtctcgtccccattctctacgactggctcgcg
aaccacaacctcgtctggccttccctctcctgcagatggggtccacaactcgaccaagct
acctacaagaaccgccagcgtctttacctctctgaacaaactgatggcagtgtacccaac
actctagtcatagcgaattgcgaagttgttaagccacgggttgctgcggctgagcacatt
tctcagttcaatgaagaagcacgttctccatttgtgaagaagtacaagaccatcattcac
cctggagaggttaacagaatcagggaactcccgcaaaacagtaagattgttgctactcac
accgacagtcctgatgttctcatttgggatgttgatacccaaccaaaccgtcatgctgtg
cttggtgctgcaagttcccgtcctgatttgatactaactggacaccaagacaatgctgaa
tttgctcttgcaatgtgcccaaccgaaccctttgtcctctctggaggcaaggacaagatg
gttgttttgtggagtatccaggaccacatcacaacggttggtactgattccaaatcatct
ggatcaatcatcaaacagactggtgaaggtggcgataagacagagagtccttctgttggc
ccgcgaggtgtatatcaaggccatgatgatacggttgaagatgtcgcattcagcccgact
agtgcacaagaattctgcagtgtgggtgacgactcttgccttatactgtgggatgcaaga
actggtactagccctgtcacgaaggttgaaaaggcgcatgatgctgatcttcattgtgtc
gattggaatcctcatgacgacaacctgatcttgacagggtctgcagacaacactgtccgg
ttgtatgatcgtaggagccttacctcaaatggagttggtacacctatttacaaatttgag
ggccacaaagctgctgttctttgcgttcagtggtctcctgataaagcatctgtttttggg
agttccgcagaagatggtctcttgaacatctgggattatgacagggtcagtaagaagtct
gatcgtgcagctaaaaaccctgcggggctcttcttccagcatgctggtcacagggacaaa
gttgttgatttccactggaatgcggcggacccttggactattgtcagtgtttctgatgac
tgtgagactactggtggaggtggaacattgcagatatggcggatgagtgacttgatttac
agaccggaagaggaagttctgacggaactggagaagttcaagtcgcatgtcatgacatgt
gcctccaagccttga
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integrated database retrieval system
