Brassica napus (rape): 106375523
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Entry
106375523 CDS
T04128
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1 isoform X1
KO
K14848
ribosome assembly protein RRB1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106375523
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106375523
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_RFWD3
PALB2_WD40
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
106375523
NCBI-ProteinID:
XP_013670913
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Position
C9:9694143..9696912
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AA seq
473 aa
AA seq
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MVRSINPKKAKRKNKKKGEASSSSSVPSMPTRVWQPGVDKLEEGEELQCDPSAYNSLHGF
HVGWPCLSFDILGDKLGLNRTEFPHTLYMVAGTQAEKAPLNSIGLFKISNVSGKRRDVVP
KTVVNGDDAMEDEDDEDEDSDSDEESEDGASTTPIIQVRRVAHHGCVNRIRAMPQNPHIC
VSWADSGHVQVWDMSSHLNALAESETEGKDGTSPALNQAPLVNFSGHKDEGYAIDWSPAT
AGRLLSGDCMSMIHLWEPASGSWTVDPIPLTGHTASVEDLQWSPAEANVFASCSVDGTIA
LWDVRVGKTPALSFKAHNADVNVISWNRLASCMLASGSDDGAFSIHDLRVIKEGDAKVAH
FEYHKHPITSIEWSAHESSTLAVSSGDNQLTIWDLSLEKDEEEEAEFKAQTKEYVNTPQD
LPPQLLFVHQGQKDLKELHWHNQIPGMIISTAEDGFNILMPYNIQNTLPDLAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagtataaaccctaagaaggcaaagaggaagaacaagaagaagggagaagcg
tcttcttcctcctcggtaccatcgatgccaacaagggtttggcagccaggtgtggataag
ctcgaagaaggagaagagcttcagtgcgacccttctgcttataattcccttcatggcttc
catgttggttggccctgtttgagttttgacattttaggtgataagttgggtttgaaccga
actgagtttcctcacacattgtatatggtggctgggactcaggctgagaaagcacctttg
aactccattggattatttaagatcagcaacgtatctggcaagagacgcgatgtagtgccc
aagacggtagtgaatggtgatgatgctatggaggatgaggatgatgaagatgaggacagt
gatagcgatgaggaaagcgaagatggagcttccactactccgattattcaggtccgcaga
gttgctcaccatggatgtgttaaccgcattcgtgcaatgccacagaatcctcatatatgt
gtctcttgggcagattcgggtcatgtacaggtgtgggacatgagctctcatcttaatgct
ttagcagagtcagaaacagaaggtaaagatggaacttcaccggctctaaaccaggcaccc
ttggttaacttttctggccacaaagatgaaggctatgctatagattggagtcctgcaaca
gctggaagacttctttccggggactgcatgagtatgattcatctgtgggaaccagcttct
ggttcatggactgttgatcctattccgttaacgggacacaccgcaagtgttgaagattta
caatggagtccagctgaagccaacgtgtttgcgtcgtgttctgtggatgggactattgca
ctatgggatgtccgagttgggaagacgcctgcattatctttcaaagcacataacgcagat
gtgaatgtcatctcatggaacaggctggctagttgcatgttggcctcaggaagtgacgat
ggagcattctctatccatgatcttagagttatcaaggagggagatgctaaggtagcacat
tttgagtatcataagcatcctatcacgtcgattgagtggagcgctcatgaatcctcaaca
cttgcagtctcttccggcgataaccagctcacgatatgggatttatccttagagaaggat
gaagaagaggaagcagaattcaaagcacagaccaaggaatatgttaacacacctcaagat
ttgcctcctcagcttcttttcgttcaccagggacaaaaggacttgaaggaactccactgg
cacaaccagattccagggatgatcatctcaactgctgaagatgggttcaacatcttgatg
ccttacaacattcagaacacacttcctgatctcgctgcctga
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