Brassica napus (rape): 106375681
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Entry
106375681 CDS
T04128
Name
(RefSeq) small RNA 2'-O-methyltransferase
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106375681
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
106375681
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106375681
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
DSRM_2
Methyltransf_12
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_23
dsrm
Methyltransf_32
Methyltransf_33
MTS
FKBP_C
AviRa
PrmA
Motif
Other DBs
NCBI-GeneID:
106375681
NCBI-ProteinID:
XP_013671111
LinkDB
All DBs
Position
C1:complement(9077479..9081408)
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AA seq
935 aa
AA seq
DB search
MAGGEKKQSLSPKEIIHHKFGVKASYRIEQVHVSSRSSCLYRCHLQLPEFSVVSNVFKRK
KDAELSAAELALEKLGIHPQDDDDITVEQAWDDMVERIKYIFSDEFLSSGHHPLGSHLRA
TLLRDGERHGSVPLSIIAAFDAKINSGCKVINPSVDQDPILAMSYVMKAAAKLTDYIVVS
PHVASLRRKNPYPPAIVEALDTHGESIKVEAVYIQCATSGEEVVDPITLDISSGRYYLDI
IAEKLGLKDGSQLIISRTFDKTAAGYECRVYSAIPKLNPSDKSSKAYGKRPVDEEEQSSH
FKNPWNAKASSACGQDIHGDAIVAALGYSWRSHHLVEHDDVTLKSFYRICCGMSPNGIYK
FSRQALIAATLPFSFTSKSNWRGPLPREMLSIFCRQQQLAEPVFTISTSPVKPLSETLRS
FKKLKDSESNDSNNQCVNEYAGSDDSFNHYNSKDEEELPVLESGYRCGVKILSKSLQDLV
LDCSPRNFYEKESHAIQNAALKALTWFGSLFDDLDADPEQPRCYTKGELNWMFTRNVMIK
GKFPSSKRYEEPAYDESKTMDMDRKPKRVQTIPNGSLVSISYSVSVEVEADFWGRTCKCL
RELIESNEEIEFEVGVGSMNPHLESVVTQMSVGQYACFITNMPAEGLVLADANDTARTRS
LLSKLAAGLEYNVHLLGVKGPTEKRVESVFFKPPLSKQRVEYAVKLIKESSAASTLVDFG
CGSGSLLESLLEVPTSLQTIVGVDISEKALARAAKMVDSKLNKGACNLKTIRLYDGSILE
FDSRLHGIDIATCLEVIEHMEEDEAFQFGKTVLTLFRPKLLIVSTPNYEYNKILHKSSLY
HSKDKSMSQRSKFRNHEHKFEWTRAQFNHWASKLAKSHNYSVEFSGVGGSGKVDPGFASQ
IAVFKRKSFTEVKKVSTQPYKVIWEWTRAQGDKKN
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggggagaagaagcaaagtctttctccaaaggagattatacatcacaagttt
ggtgttaaagcaagttacagaattgagcaagttcatgtctcttctcggagtagttgtctc
tatcgatgccacttgcagctaccagaattttccgttgtatcaaatgtcttcaagaggaag
aaagatgctgaactatcagctgctgaattggctctggagaagctaggcattcaccctcag
gatgatgatgatataactgtggaacaagcctgggacgatatggttgaacgcattaagtat
atattctctgatgagtttctttcatctggtcatcatcctcttggaagccacctcagagca
acattgctaagggacggtgaacgtcatggatcagttcctctttccatcatcgctgcattt
gatgcaaagattaacagtggctgcaaagttatcaatccctccgttgatcaagatcctatc
ttggccatgtcctatgtcatgaaggctgctgcaaagctaacggactacattgtcgtatct
ccgcatgtagcttcactccgaaggaaaaatccataccctccagcaatcgtagaagcactg
gatactcatggagaaagcataaaagttgaggctgtgtatatacaatgtgccactagcggc
gaagaggttgttgatccgatcacacttgatatctcatcaggccggtattacttggatatc
atcgctgaaaagcttggtttgaaggatggcagccagctgattatatccaggacttttgat
aaaactgccgctggttatgaatgtagagtatactctgctatccctaagttgaatccttca
gataaatcatcgaaagcctatggaaaacgaccagttgatgaagaagaacaatcatcacat
ttcaaaaacccctggaatgctaaagcaagttctgcttgtggtcaagatattcacggtgat
gcgatagtggcagctcttggttactcatggaggtctcatcatcttgttgaacatgatgat
gtaaccttgaagtcattttacaggatatgttgcggtatgtcacccaatggcatctacaaa
ttctccagacaagcactaatcgctgcgacgttgcctttctcattcacttcaaagtctaat
tggagaggtccactcccgagggagatgctctccatcttctgccgccagcaacaactagcc
gagcctgtcttcacaatatctacttctcctgtgaagccactctcagaaacattaagatcc
ttcaagaagttgaaagactcagagtcaaacgatagcaacaatcagtgtgtgaacgagtac
gcaggatcagatgattccttcaatcattataacagcaaggacgaagaggagcttccagtg
ttagagagtggttacagatgcggagtgaagattctctcaaagtctctgcaggacttggtt
ttagattgctcaccaaggaacttctacgagaaggagagccacgctattcaaaacgctgca
ttaaaggccttaacatggtttggcagcttgttcgatgacctggatgctgacccggaacag
ccacgctgctatacgaagggagaactgaactggatgtttacacggaatgttatgatcaaa
gggaagtttccaagtagtaaaagatatgaagagcctgcgtatgatgagtcaaagaccatg
gatatggatcgcaaaccaaagcgtgttcagactataccaaatggttccttggttagcata
tcttattctgtgtctgtggaggtagaagctgacttttgggggaggacctgtaaatgtttg
agagaactcatagaaagcaatgaagagatcgagtttgaagtaggggttggatccatgaat
ccacatcttgaatcagtcgttactcagatgtctgtgggacaatatgcttgttttataact
aatatgcctgcggaagggttggttttggctgatgccaatgatactgcgagaactcgttcg
ctcttatcaaaactcgcagcaggtttggagtataatgtgcatttgttgggagtgaaaggg
ccgacagagaaacgagtggaatcagtttttttcaagcctccactttcgaaacagcgtgtg
gaatatgcagtgaaacttataaaagaatcatcagcagcttctactttggttgactttgga
tgtggatctggaagtttactagagtctttacttgaggttccaacttcacttcaaaccatt
gtcggcgttgacatctcagagaaggctcttgcccgtgctgctaagatggtagactcaaag
ttaaacaagggagcttgcaacctcaaaactattagactctatgatggttctatactggag
tttgattccaggctgcatggcattgacatcgccacttgcttagaggtcattgagcacatg
gaggaagatgaagcctttcaatttgggaaaacagttcttaccttgtttcgtccgaagctc
ctgattgtctccacaccaaactacgagtacaacaaaattcttcacaagtcttctctgtat
cactcaaaagacaagtccatgtcacagcggtcaaagttcagaaaccatgaacacaagttc
gaatggacgagggcacagtttaaccactgggcatctaaactcgccaaaagccataactac
agcgtcgagttcagcggtgttggagggtctggtaaggtggatccagggtttgcttctcag
attgctgttttcaaacggaagtctttcactgaagtgaaaaaggtctcaacgcagccttat
aaagtcatatgggagtggacaagagcacagggagacaaaaagaactag
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