Brassica napus (rape): 106375990
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Entry
106375990 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106375990
00071 Fatty acid degradation
106375990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106375990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106375990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106375990
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106375990
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106375990
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106375990
Exosomal proteins of breast cancer cells
106375990
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
UPF0150
Motif
Other DBs
NCBI-GeneID:
106375990
NCBI-ProteinID:
XP_048597272
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Position
A1:complement(7711547..7716064)
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AA seq
667 aa
AA seq
DB search
MTQQLEKFIFQVEEGREGSDGRPSVGPVYRSVFAKDGFPEPIEGMDSCWDVFRMSVEKYP
NNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSCGVEEQAKCGIYGANSPEWII
SMEACNAHGLYCVPLYDTLGAGAVEFIITHSEVSIVFVEEKKISELFKTCPKATEYMKTV
VSFGGVTREQKEAAETFGLVIYAWDEFLKLGEGKQFDLPIKKKSDICTIMYTSGTTGDPK
GVMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGF
WRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQQKLAAGGFFKKFMFDSAFSFKYGHM
KKGQSHVEASPLCDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYG
LTESCAGTFVSLPDRLDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLF
SGYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIY
GEVQAVDSVWVYGNSFESFLIAVANPNQHILEKWAAENGVSGDYNALCQNAKAKEFILGE
LVKMGKEKKMKGFEIIKAVHLDPVPFDMERDLLTPTYKKKRPQLLKHYQSVIDEMYKTTN
ESLASRK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagctagagaaattcatcttccaagtcgaggaagggagagaaggtagcgat
ggaagaccttccgtgggacctgtctaccgcagtgtcttcgccaaggacgggttcccggag
ccgatcgaaggaatggatagttgctgggatgttttccgcatgtctgttgagaagtatcca
aacaatccgatgcttggccgccgtgagattgtagacggaaagccggggaagtatgtatgg
caaacgtaccaagaagtctacgacattgttataaagctgggaaactctctccgaagttgt
ggagttgaggagcaagcgaaatgtggtatctatggtgctaattctcccgagtggatcata
agcatggaggcatgtaatgcacatggactctattgtgtccctttgtatgatacacttggc
gctggtgctgtggagttcattattacccattctgaggtttcaattgtctttgtggaggag
aagaagatctctgagttatttaagacatgcccaaaggccacagagtacatgaagaccgtt
gtgagcttcggtggtgtcacacgtgaacaaaaagaagcagctgaaacttttgggttggtc
atatatgcttgggatgagtttttgaagctgggcgaaggaaagcagtttgatcttccaatc
aagaagaagagtgacatttgcacgattatgtatactagtggaaccactggtgatccaaag
ggagtgatgatatctaacgaaagcattgttacccttatcgctggagtgatccgtttactg
aaaagcgctaacgaagccttgactgtgaaagatgtgtacctttcttaccttcctctcgcc
cacatctttgaccgagttatcgaggagtgttttatccaacatggtgctgcaattggtttt
tggcgtggggatgtcaagctgttgatagaagaccttggcgagcttaaaccaactattttt
tgcgctgtacctcgtgtcctagatagagtttactcaggtcttcagcagaagcttgctgct
ggtggattcttcaaaaagttcatgtttgattctgcattttcctttaaatatggacatatg
aagaaaggacagtctcatgtagaggcctctccattatgtgacaaacttgtattcagcaag
gttaaacaagggctcggaggcaatgtgaggatcattctatcgggagctgctcctctcgct
agtcacgtagagtcatttctaagagtggtggcttgctgtcatgttcttcaaggatacggt
ctaaccgagagctgtgctggaactttcgtctcgctgccggatcgactggacatgctcggg
acagttggaccaccagtgccaaacgtggatatacgccttgaatctgtacccgaaatggaa
tatgatgctcttgcaagtactccacgtggtgaaatctgcattcgtggaaagacccttttc
tctggatactacaaacgtgaagacctcacaaaagaggttcttattgatggatggctgcac
acaggtgatgttggggaatggcaaccaaatggaagcatgaagataatcgacaggaagaag
aatatatttaaactctcacaaggagagtatgttgcggtcgagaacttggaaaacatctat
ggtgaagtacaagctgttgattccgtgtgggtgtacgggaacagctttgaatccttccta
atcgcagtcgccaatccaaaccagcatatccttgagaaatgggctgcagaaaacggtgtg
agcggtgactacaacgctctctgtcaaaacgcaaaggcaaaggaattcatcctcggagaa
cttgtgaaaatgggcaaagagaaaaagatgaaggggttcgagatcattaaggcggttcat
ctagacccagtgccgtttgacatggaacgcgatcttctcactccgacttacaaaaagaag
aggcctcaattgctgaaacactaccagagtgtgatcgatgaaatgtacaagaccacaaat
gagagcttagcttccagaaagtaa
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