Brassica napus (rape): 106376186
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Entry
106376186 CDS
T04128
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106376186
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106376186
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
U-box type E3
106376186
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106376186
NCBI-ProteinID:
XP_048600284
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Position
C1:complement(16467179..16472539)
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AA seq
859 aa
AA seq
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MAIYYKFKSAKAYDTISMDGPFISVGFLKEKIYETKHLGSGKDLDIVISNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRIRVINQQEPRVEEKVENVQTEMNNHIAADASAAEDEFDEF
GNDFYSVPAATAVNYSNPGPDPAPADEKVDEETKLKALIDTPALDWQQQSADGYGPGRGY
GRGMSGRTGGRGFGNGMERKTPPPGYICHRCNVPGHFIQHCPTNGDPTYDVKRVKPPTGI
PKSMLVATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLRSVTRSVGELPPELKCPLCKEVM
RDAALTSKCCYQSFCDKCIRDHIIAKSMCVCGATNVLADDLLPNKTLRDAINRIMESGNS
SAENAGGMCQVQDMESARCLAPKVLSPTTSAASKGEKKPAPSNNIETSPLKPPVEVAEIT
SAPKVSEEIVKADKPVDASESLNGKEAVVSQVNTQAPKEETQQQAVPGDQGKKKKKKPRM
PGPDMQWNPMQHPAGPDYMMPPPMGPGPSNHFFNGVQPGFNGFQPGFNGFHPGLNGFTGP
YPGGMPPYVGYGLGPMDMYGGMLHPDPFAAQGFGFPNIPPPHRDLAEMGNRMNVQRPMMP
GREEFEARKAEMKRKRENERRSEGGNVLREGEKSRMMNNNSADSSSPMKPKSGHGPPPPI
PDYDRRRRSERLSSERQSSRPRVSSPSRVSSKKSEHDHHRSRRDDDRSRERHRDDDQSRE
RHRDDDKSRERHRESDRKHRKRSDMPSSEPTSEFVDNHKSGVFSRISFPEGASSGKQRKT
SKSSPAPPETSTAAAVSSTRCHSGGERESAEYESSDDEDRHFKRKPSRYYERSPSVADSD
VGDEHFRRSKRSKGERWRA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttattacaagtttaagagtgccaaggcttatgataccatctccatggatggt
ccttttatatcagttggttttctcaaagagaaaatttacgaaactaagcatttgggcagt
ggtaaagaccttgacattgtcatctctaatgcccaaactaacgaagaatatctggatgaa
gcaatgttaatcccaaagaatacttctgtcctaattcgccgggtccctggacgccctcgc
atcagggttatcaaccaacaagagccgagagtggaggagaaagtggaaaatgttcagact
gaaatgaacaatcatattgctgccgatgcatctgctgctgaagatgagtttgacgagttt
gggaatgatttttattcagttcctgctgccacagctgtcaattatagtaacccaggtcct
gatcctgcaccagccgatgagaaagtagatgaagaaaccaaactcaaggcgttgatagac
actccagcattagactggcagcaacaaagtgcagatggttatggcccgggcagaggttac
gggaggggtatgtctggaaggacgggtggacgcggttttgggaatggaatggaaaggaaa
acgccgccaccaggatatatatgccatcgttgcaatgttcctggacattttattcagcac
tgccctacaaatggcgatcctacatatgatgttaagagagttaaaccacctactggtatt
cccaagtctatgcttgtggcgaccccagatggctcttattctttgccaagtggcgcagtt
gcagttttgaaaccaaacgaggatgcgtttgagaaggaaatggaggggttgcggtcagta
acacgttctgtgggggagcttcctcctgagctaaaatgccccttatgcaaagaagtgatg
agagatgctgccctgacgagtaaatgctgttaccagagcttctgtgacaagtgtatcaga
gatcacataattgcaaagtcaatgtgtgtttgtggagccaccaatgtactagctgatgat
cttctaccaaacaagaccctcagggatgctataaaccgtatcatggagtctggtaacagt
agtgctgagaacgctggcggcatgtgtcaagtccaagatatggagtctgcacgttgccta
gctccaaaggttctgtctcctactacatctgctgcatctaaaggggaaaagaaaccagct
cctagtaacaacattgagacttcacctctaaagccgccagtagaagtagcggagatcaca
agtgctcctaaggtgtctgaagaaatagttaaagcggataaaccagttgatgcatccgaa
agcttgaatggcaaggaagcagtagtttcacaggtgaatacgcaagctcccaaggaagaa
acacagcagcaggctgttcccggggatcaaggaaaaaagaagaaaaagaaacctcggatg
cctggacccgacatgcaatggaaccccatgcagcatccagcaggccccgactatatgatg
ccgccaccgatgggtccaggtccaagtaatcattttttcaatggtgtgcaaccgggcttt
aacggctttcaaccagggttcaatggctttcatcctggtctcaatggctttacaggccct
tatcctggcggtatgcctccttatgtcggttatggattaggccccatggacatgtatggg
ggtatgttgcatccagatccttttgctgcacagggctttgggttccctaacataccacca
cctcatagggaccttgcggagatggggaatcgtatgaatgtccaacgtcctatgatgcct
gggagagaggaattcgaagctaggaaagctgagatgaaacgaaagcgtgaaaacgagaga
cggtcggaaggagggaatgtcttgagggaaggtgagaagagcagaatgatgaataacaac
tcggcagactcttcctcacccatgaagccaaaatctggacatggacctccgcctccgatc
cctgattacgaccgtcgtcggcgatcggagagattatcatcagagcgtcagtcatctcgg
ccaagggtcagctcgccctctcgagtatctagcaagaaatctgagcatgatcatcaccgc
agccgccgggatgatgatcgaagtcgcgaacgccaccgggacgatgatcaaagccgggaa
cgccaccgggatgatgataaaagccgagagcgtcacagggaatctgatcgtaaacaccgt
aagagatcggacatgccatcatcggagccaacttcagagttcgttgataaccacaagtcc
ggcgtattctctaggataagctttccagagggggcatcttcaggcaaacaacgtaaaacg
tcaaagtcttctcccgcgccgccagagacctcgacggctgccgccgtttcatcgactcgt
tgtcatagtggtggggaaagagagtcggcagaatacgaatccagtgatgatgaagacagg
catttcaagaggaagccgtcaaggtactacgagcggtctccatcggtggcagattccgat
gtcggtgacgagcatttccgtcgttcgaagcgatcaaaaggagaaaggtggcgcgcttga
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