Brassica napus (rape): 106376499
Help
Entry
106376499 CDS
T04128
Name
(RefSeq) tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00260
Glycine, serine and threonine metabolism
bna00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106376499
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
106376499
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
106376499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
106376499
NCBI-ProteinID:
XP_013672044
UniProt:
A0A816JF72
LinkDB
All DBs
Position
C4:46474301..46476812
Genome browser
AA seq
500 aa
AA seq
DB search
MASQLLLPTNTFTNSSLDKVFVTGDDLTLKRKPNHATRVSYGFSLRANAALNSSHSSYVE
VPRQWYNLVADLSVKPPPQLHPKTFEPIKPEDLAHLFPNEIIKQEETLERFIDIPEEVLE
IYKLWRPTPLIRAKRLEKLLHTPARIYFKYEGGSPAGSHKPNSAVPQAYYNAKEGVKNVV
TETGAGQWGSSLAFASSLFGLDCEVFQVAHTYQQKPYRRLMMQTWGAKVHRSPSELTEAG
RRILQADPSSTGSLGIAISEAVEVASRNEDTKYCLGSVFNHVLLHQTVIGEECIKQMEEY
GETPDVIIGCTGGGSNFAGLSFPYIREKLKGKINPIIRAVEPSACPSLTKGVYAYDFGDT
AGLTPLMKMHTLGHDFIPSPIHSGGLRYHGMAPLVSHIYGQGFMEAISIPQTECFQGAIQ
FARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLASYEKYLRGELV
DLLFSEEKIQESLSKVPLVV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcagttgcttttgccaacaaacacattcaccaattcatccttagataaagtt
ttcgttacaggtgatgacttgactctgaaaagaaagccaaaccacgcaacaagagtttca
tatggatttagcttaagagcaaacgcagctttgaactctagtcatagctcatatgttgaa
gttccacgtcaatggtacaatcttgttgctgatctctctgttaagcctcctccacagttg
caccccaaaactttcgaaccaatcaaacccgaagatttagctcatcttttccctaatgag
ataattaagcaagaagaaacactagagagatttatcgacatccccgaagaagttcttgaa
atctataagctttggcgtccaactcctcttatcagagcaaagagattggagaagcttctt
catacacctgcaaggatttacttcaagtatgaaggtggtagcccagctggttcacacaaa
cccaactcagcagttccacaagcttattacaatgcgaaagaaggtgtcaagaacgttgtg
acggaaacaggcgctggccagtggggcagttctttagcctttgcttctagtctatttgga
cttgattgtgaagtgtttcaagtggcccatacataccaacaaaagccatatcgcaggctg
atgatgcaaacttggggtgcaaaggttcatcgatcaccatcggaactcaccgaggcaggt
agaagaatccttcaggcagatccatcaagcacaggaagtttaggcattgcaatttcagaa
gctgttgaagtcgcatcaagaaacgaagatacaaaatactgtttagggagtgtatttaac
catgtgttgttacaccagacggttattggagaagaatgcataaagcagatggaagaatat
ggcgaaacgcctgatgtgatcataggatgtactggtggaggatcgaattttgctggtttg
agttttccctatatccgggagaaactcaaaggcaaaatcaaccctattatacgagcggtt
gagccctcggcttgtccttcattgaccaaaggagtttacgcttatgattttggtgataca
gctggattgactcctttgatgaagatgcatactttagggcatgacttcattcccagtcct
atccattccggtggattacggtaccatgggatggcaccgttggtctcacatatttatgga
caaggtttcatggaagcaatctcaattcctcaaactgagtgcttccaaggtgctattcag
ttcgcgagaacagaagggataatacctgcgccagaaccgactcacgccattgctgcaacc
ataagagaagctctccgatgcaaagaaacaggtgaagcaaaagtgatactaatggccatg
tgtggacatggccacttcgaccttgcctcgtatgaaaaatatttacgaggtgaattggta
gatttattatttagcgaagagaagattcaagagtctttgtccaaggttcctcttgttgtc
tag
DBGET
integrated database retrieval system