Brassica napus (rape): 106376520
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Entry
106376520 CDS
T04128
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106376520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106376520
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
106376520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
106376520
NCBI-ProteinID:
XP_048596683
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Position
A1:complement(6816643..6819926)
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AA seq
505 aa
AA seq
DB search
MKSEREVKNGGVEEERDAKRKRVIESSNDHDVEEAENEQKKDNGAARVEEKSTIGLDDDE
GRGKRSRHVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKS
HAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVEELDRNKQ
WSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRVTPLRNFFLIPENYQHCKSTLVHRF
GELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTS
KDASSIIHQCFQGELEVVREYQGNENKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVA
LFDLLKKFDGETVTEVVRPRLARMRYRVTKSPPYLMFHMVRFKKNNFFKEKNPTLVNFPV
KDMELRDYIPSLPTAAEGEKTCTKYNLIANVVHDGKPEDGYFRVFVQRKSQELWYEMQDL
HVAETLPQMVELSEAYMQIYELQEE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgagagagaagttaagaacggtggtgttgaggaagagagagatgcgaagcgt
aagagagtgatagagtcatctaatgatcacgatgtcgaggaagcggagaacgagcagaag
aaggataacggagctgcgagagtggaggagaagagcacaatcggactcgatgacgatgaa
ggtcgagggaaacgttcacggcatgttgaagttcgtcgagattgcccctatcttgatact
gttaatcgtcaggttttggattttgatttcgagaggttttgctcagtctcattgtcgaat
ttgaatgtctatgcgtgtcttgtgtgcgggaagtacttccaagggagaagccagaagtct
catgcttatacacatagcttggaagcaggtcaccacgtttacatcaatcttctcacggag
aaggtgtattgtcttcctgatagttacgagatcaatgacccttctttggatgacattcgt
catgttttaaacccaaggtttagtagggcacaagtagaagagcttgataggaataagcag
tggtctagggctcttgatggctctgactatctcccgggaatggtgggattaaacaacata
caaaagacagagtttgtgaacgttacaatacaatcgttgatgagagttactcctctaagg
aactttttccttattcccgagaactatcagcattgcaagtctactcttgttcaccgcttt
ggggaactcactcgaaagatttggcatgctcgaaacttcaaaggacaggtaagtccacat
gagttcttgcaggctgtcatgaaagccagtaagaagcgatttagaataggccagcaatca
gatccagtagagtttatgtcgtggctccttaacactttgcacatggatcttcgaacttca
aaggacgccagcagtatcatccaccagtgcttccagggtgagttagaagttgtgagagag
tatcaaggcaatgaaaacaaagaaatatccaggatgccttttctgatgctggggctagat
ttgccaccgcctcctcttttcaaagatgtcatggagaaaaacattatcccgcaggttgct
ctattcgatctgttgaagaagttcgatggagaaactgtgacagaggtggttcgcccaagg
ctagccagaatgagatatcgagtaaccaaatctcctccgtacttgatgttccatatggtt
cggttcaagaagaacaacttcttcaaggagaagaaccctaccttggttaacttcccagtg
aaagacatggagctgagggattacataccatcattgcctactgccgctgaaggggagaag
acgtgtacaaagtataacttaatcgccaacgttgtacatgatggtaaaccagaggatggg
tatttcagagtgtttgtgcagcggaagtcgcaagaactctggtacgagatgcaggatttg
catgttgcagagacgctcccacagatggtggaactatcggaagcatacatgcagatatat
gagctgcaggaggaatag
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