Brassica napus (rape): 106376596
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Entry
106376596 CDS
T04128
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106376596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106376596
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106376596
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_EndoS
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
106376596
NCBI-ProteinID:
XP_013672140
UniProt:
A0A816QIN8
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Position
C6:complement(32599802..32602207)
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AA seq
359 aa
AA seq
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MVSEEGSATLDRCFEKMKMEGIVISEWKDIPVELLMKILNLVDDRTVIIASGVCSGWRDA
ISFGLTRLSLSWCKKNLNSLVLSLAPKLVKLQTLVLRQDNPQLEDNAVEAIANHCHELQD
LDLSKSLKLTDHSIYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVE
AVSDNALQAIGENCNEMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVV
ALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKNEMWRSVKKGKFDEEGLRSLNISQ
CTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRTHTALPHPAH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgaagaagggtcagcaacacttgaccgatgctttgaaaagatgaaaatggaa
ggtatcgtgatcagcgagtggaaagatatccctgtggagcttctcatgaagatccttaac
cttgttgatgatcggacggtcatcattgcttctggtgtttgcagtggctggagagatgct
atttcctttggtctcactcgtctctccctctcttggtgcaagaagaacctgaacagtttg
gttctgtctcttgctccaaaactcgtcaagcttcagacattagtattgagacaggacaac
cctcagcttgaggacaacgcagtggaagcaatagcgaatcactgtcacgagctacaagat
cttgacctaagcaaaagcttgaaactcaccgaccattctatctattctctggctcgcggt
tgcacaaacctcactaaactcaaccttagcggctgcacttcattcagcgacactgctttg
gcctatttgacaaggttttgcaggaagctcaaagttctgaatctttgtggttgtgtggaa
gctgtatctgacaatgcattgcaggctattggagaaaactgcaatgagatgcagtcacta
aacttgggatggtgtgagaatataagtgatgatggagtcatgagcctagcttatggctgt
cctgatctaagaacccttgatctttgcggctgtgttctaattacagatgagagtgttgtt
gctttggcaaataagtgtgtacacttgaggtcgttggggttatactattgcaggaacata
acagacagagcaatgtactcactggctcagagtggagtgaagaacaagaacgagatgtgg
cggtcggttaagaaaggaaaattcgatgaagaaggtctaagaagcctcaacattagccaa
tgcacttacctcacaccttcagcggttcaagctgtctgtgatacattccctgcgctccac
acttgctcaggcaggcattctctggtcatgagtggttgtctgaacctaacatcagttcac
tgtgcctgtatcctccaggctcaccgcacccacaccgctctccctcacccggctcattaa
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