Brassica napus (rape): 106376742
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Entry
106376742 CDS
T04128
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106376742
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
106376742
NCBI-ProteinID:
XP_013672311
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Position
C1:31497606..31502540
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AA seq
665 aa
AA seq
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MAASNHPSGKPGGALSDALCRELWHACAGPLITLPREGERVYYFPEGHMEQLEASMHQGL
EQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCT
VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIF
RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSH
SMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEG
EEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNT
PSAHLPPQRNKRPRPPGLLSPTTAPSTPVTADGVWKSPADNPSSVPLFSPPAKTAALGLG
GNKSFGVSIGSAFWPTHADGAAESFASALNNESPTEKKQTNGNVCRLFGFELVENMNVDE
CFSAASVSGAVAVDQPVPSNEFDSGQQSESLNINQANLPSGSGDHEKSSLRSPQESQSRQ
IRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDD
MMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLTVNVRMQPKTDADENGNTEGRSSS
MAGSR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagctagcaatcatccatctggaaaacctggaggggctttaagtgatgctttatgt
agggagctgtggcatgcttgtgccggacctcttataaccctacctcgtgaaggggaaaga
gtttattatttccctgaaggtcacatggagcagcttgaggcatcaatgcatcaaggtctg
gaacagcagatgccttcctttaatctcccatctaagattctctgtaaagtgatcaatatc
cagcgaagggcggagcccgagactgacgaagtatatgcgcaaataaccttattgccagaa
gcggatcaaagtgaacctatgagcccggacgcccctgttcaagaacctgaaaagtgcaca
gtacattcattttgcaagacactaactgcttcggacacaagcacacatggtggattttct
gtgctacggagacacgcagatgattgtcttccacccttggacatgtcccaacaaccacca
tggcaagaactggttgcaactgatttgcacaataatgaatggcattttaggcacattttc
cgaggccaaccaaggcgccatttgctaacaactgggtggagtgtttttgttagctcgaag
aaactggttgctggtgatgctttcatattcttaaggggtgagaatgaagagctccgagtt
ggtgttaggcggcacatgagacaacagactaatatcccctcctctgtcatttcaagtcat
agcatgcatattggggtccttgcgactgccgctcatgccattacaacaggaacaatcttt
tccgtcttctacaagccaagaactagtaggtcagagtttattgtgagcgtcaataggtat
ctcgaagccaagaaccagaagctggctgtaggcatgcgtttcaagatgagattcgagggt
gaagaagctcccgagaaaaggttcagtggcacaatagttggtgttcaggaaaacaaatct
tcggtctggcatgattctgaatggagatcgctgaaggttcaatgggacgagccttcatct
gtgtttcgtcctgaaagagtttcaccatgggaacttgagcccctagttgcaaataatacg
ccttctgcacatcttcctccacaaaggaacaaacgaccgagacctccgggtttgctgtca
ccaaccaccgctccatctactcctgttactgcagatggtgtgtggaaatccccggcagac
aatccttcctcggtaccgttattctctcctcctgccaagaccgccgccttgggtcttggt
gggaacaaatcatttggagtatccattggatcagccttctggcccactcatgcagatggt
gcagctgaatcctttgcttcagcgcttaacaacgagtctcctactgaaaagaagcaaact
aatggaaatgtctgcaggctttttgggtttgagctggttgaaaatatgaatgtggacgaa
tgtttctctgctgcttctgtgtccggtgctgtggctgttgatcaacctgtcccatccaat
gagtttgactctggtcagcaatctgagtcgttaaatatcaaccaagctaatcttccttcg
ggtagtggcgatcatgagaaatcctctctgaggtctccgcaagaatcgcaaagtaggcag
atacgtagctgcacaaaggtacacatgcaaggtagtgcagtaggcagagctgttgacttg
acaaggtcagagtgttacgaggatctgttcaagaagctggaagagatgttcgacatcaag
ggtgaacttttagaatctaccaaaaaatggcaagttgtttacaccgatgatgaagatgac
atgatgatggttggtgacgatccatggaatgagttctgtggaatggtgagaaagatattt
atctacacacccgaagaagtgaagaaactttcacccaagaacaaactcacagtcaatgtt
aggatgcaacccaaaactgatgcagacgaaaatgggaacacagagggcaggtcatcatcg
atggctggatcaagatga
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