Brassica napus (rape): 106376932
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Entry
106376932 CDS
T04128
Name
(RefSeq) crossover junction endonuclease EME1A isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106376932
03460 Fanconi anemia pathway
106376932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106376932
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106376932
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
106376932
NCBI-ProteinID:
XP_013672518
UniProt:
A0A078IA78
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Position
C4:47476424..47479876
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AA seq
564 aa
AA seq
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MGFFFISKKLIDGCPAFTLTRIVLPTLLPSSVSFSMSYPIFISDDDATPPPPFPSNKRPR
KNPPPTPTVETEASSSSPLLVDDDDDVTVVRCPLGSAAGSSSRRREEILAGKGVISLDSD
SEDTPGAGAETSNKYGPTIHVDSLQHPCRLEPLTSDSDSDNSTDWLRGPSSQSSLPKVAI
EVDSDQENEDVSVEKMSRQKQTSGSKSPSLSGNALPRKRLSKDERIRAAEEKKLRKEQEK
LQRAASRAEEAEKRKLDKEMQKRGKGKLALKSIVAEIDLQLVEGALGAPLITLFAEKGIT
YRVISNPIKSSIVWTMTTLPEDVSQKIPYVLLVHEAEEFCNLVANERLLENVSRVRDQYP
SYTVCYLTNKLISYVEKREKKDYNVGKSNGWKRPPIDEVLAKLTTHYDRVHSRHCIDGPE
VAAHVVGLTSSLASCHFRKKSSWLSVKAEGIVASMDSVDKHLIKKSPWLKALIAIPKVQP
RYAVAVGKKYPTMKSLLKVYMDPNKSEQEKELLLKDLKLEGLTGKDANLGIVGSKRIYRV
LMSRTGELKTDEVASQIYSPHDLD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggttttttttttatcagtaaaaagttaatcgatggttgtcccgccttcactctcact
cgaatcgtactccctactcttttgccaagttcagtttctttctccatgagttatccgatt
ttcatctccgacgatgatgctactcctccacctccattcccatccaacaagaggcctcga
aagaatcctcctcccacccctaccgtcgaaaccgaagcttcttcttcttctcctctgctc
gtcgacgacgacgatgacgtcaccgtcgtcagatgtccccttggttccgcagctggctcc
tcttcgcggcgccgtgaagaaattttagccggtaaaggagtgatatctcttgactcggat
tctgaagacactcctggagctggagctgagacttcgaacaagtatgggcccaccatacat
gttgattctttgcagcatccttgtcgattggagcctcttaccagtgattctgattctgat
aatagtactgattggttgcggggacccagttctcaatcttcacttcccaaagttgctatt
gaggtcgattctgaccaagagaatgaagacgtaagtgttgagaaaatgagtcgacaaaag
cagacatccggctctaaaagtccatctctttctggtaacgcattgccaagaaagcggttg
tcaaaggatgaaagaatccgtgccgcagaggaaaaaaagttaaggaaagaacaagagaaa
ttacagagagctgcctcgagagcagaagaagctgagaaaaggaagttggacaaggaaatg
cagaaacggggaaaaggaaagttggcgcttaaatctatcgtcgctgagattgatcttcag
ttggttgaaggagcccttggagcacctctgatcacactgttcgctgagaaaggcattacg
taccgtgtaatctctaatccaatcaagagttctattgtgtggacaatgacgacacttcca
gaggatgtttctcagaagattccatatgttttacttgtgcacgaggctgaagaattttgc
aatcttgttgcaaatgaaagacttctagaaaacgtctcgagagttcgggaccaataccca
tcttatacagtgtgctacctcacaaataaattgatttcatacgttgaaaaaagggaaaag
aaagattataacgtgggaaaatccaatggttggaagcgacctcctattgatgaggtgctt
gcaaagttaacaacgcactatgatagagtgcattccaggcattgtatagatgggcctgag
gtggctgcacatgttgttggtttaacgagcagtctggcctcttgccacttcaggaaaaag
tcatcttggttatcagtaaaggctgaaggtattgtagcctccatggattctgttgacaag
catttgattaagaagagtccatggttaaaagcgttaatagcaataccaaaggtgcagcca
agatacgcggtagcagtggggaagaaatatccaacaatgaagtctcttcttaaggtgtat
atggatcctaacaaatcggaacaagagaaggagttgcttctaaaggacttgaaattagaa
gggttaacaggaaaagacgcaaacttaggaatagttggttctaagcggatatatagagtt
ctcatgtctaggactggagaacttaagactgatgaagtggcttcacagatttattctcca
cacgacttggactag
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