Brassica napus (rape): 106376988
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Entry
106376988 CDS
T04128
Name
(RefSeq) tryptophan synthase beta chain 2-like
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00260
Glycine, serine and threonine metabolism
bna00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106376988
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
106376988
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
106376988
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
106376988
NCBI-ProteinID:
XP_013672587
UniProt:
A0A816Q5A8
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Position
C6:20978441..20985655
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AA seq
500 aa
AA seq
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MTSQLLLPPNPFTRPVSAKVFLTDDDLTLKRKSNQATRVSNGFSLRAKAALRSNHSSSVE
IPNQWYNLTADLSVKPPPPLHPKTLEPIKPEDLSHLFPNELIKQEATLERFIDIPEEVLE
IYKLWRPTPLIRAKRLEKLLQTPARIYFKYEGSSPAGSHKPNTAVPQAYYNAKEGVKNVV
TETGAGQWGSSLAFASSLFGLDCEVWQVANSYHQKPYRRLMMQTWGAKVHPSPSDLTEAG
RKILESDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTVIGEECIKQMEDF
GETPDVIIGCTGGGSNFAGLSFPFIREKIKGNISPVIRAVEPSACPSLTKGVYAYDFGDT
AGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIECFQGAIE
FARAEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLSSYDKYLKGELV
DLSFSEDKIRESLSKVPHVV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcagttgcttttgccaccaaacccattcaccagaccagtctcggctaaagtt
ttccttacagatgatgacttaactctgaaaagaaagtcaaaccaagcaacaagagtttca
aatggatttagcttaagagcaaaagcagctttaagatctaatcatagctcatctgttgag
attccaaatcaatggtacaatcttactgccgatctttctgttaagcctccaccacccttg
catcccaagactttggaaccaatcaaacccgaagatttatctcatcttttccctaatgag
ttaatcaaacaagaagcaacgttagagaggtttatcgacatccctgaagaagttcttgaa
atctataagctctggcgtccaactcctctaatcagagcaaagagattggagaagcttctt
cagacacctgcaaggatttacttcaagtatgaaggtagtagcccagctggttcacacaaa
cctaacacagcggttcctcaggcttattacaatgcgaaagaaggtgtcaagaacgttgtg
actgaaaccggcgctggccaatggggcagttctttagcctttgcctctagtctatttgga
cttgactgcgaagtgtggcaagtggccaattcataccatcaaaagccataccgccggtta
atgatgcaaacgtggggagcaaaggttcatccatctccgtctgatctcactgaggcgggt
agaaaaatccttgaatccgacccatcaagcccgggaagtttaggcattgcgatctcagaa
gctgttgaggttgcagctagaaacgaggatacaaagtactgtttaggaagtgtactgaac
catgtgttgttacaccagacggttattggagaagaatgcataaagcagatggaagatttt
ggtgaaacgcctgatgtgatcataggatgtaccggtggaggttcaaattttgctggtttg
agttttccttttatccgggagaaaatcaaaggcaatatcagccctgttataagagctgtt
gagccatctgcttgtccttccttgaccaaaggagtttatgcttatgattttggagataca
gctggactgactcctttgatgaagatgcatactttaggacatgacttcattcctgatcct
atccatgccggtggattacggtatcatgggatggcacccttgatctcacatgtttatgaa
caaggtttcatggaagcaatctcaattcctcaaatcgaatgtttccaaggtgccattgag
tttgcaagagcggaagggataataccagcgccggaaccaactcacgccattgcagcaacc
ataagagaagctctccgatgcaaagaaacaggagaagcaaaagtgatactaatggcgatg
tgtggtcatggccactttgacctttcctcttatgacaagtatctaaaaggcgaattggtg
gatttatcattcagtgaagacaagatacgagagtctttgtccaaggttcctcatgttgtt
tag
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