Brassica napus (rape): 106377018
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Entry
106377018 CDS
T04128
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1-like
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106377018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106377018
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106377018
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
106377018
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
106377018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
UvrD-helicase
Cas_Cas4
ResIII
UvrD_C
nSTAND3
Dna2_Rift
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
106377018
NCBI-ProteinID:
XP_048621380
LinkDB
All DBs
Position
C8:48153261..48162611
Genome browser
AA seq
1321 aa
AA seq
DB search
MPPRKKPKSSALKTNKQSSSNQSSQPSGVGIQQLFQRHIHNSQSTSNSLASNPVVSTPPN
PPSTVDEKPDESKDVDRELTEASPEVSRNAKRFKFSPGMLIKQSQDDGGEDITWKISPID
QRLRAAAKQVPKMMDLTENSVGFKSSTLRPCSLDKVVQKQCPTSDITSKVEQWLSSPSKK
AFKRPALPANRVTERVNPSLDAEFEIVNTSSSGNSPFQTPPSLSCSHNKLPCTVTCSAAC
GVTGTGQHKKALLELLDQVEDVISVDDKTADDVGTVVPQIRLEDDNICSVGVCNSVDGGP
IALLKKDNSVNPDSYFLVLEVSEKRGLAGSSRVQCPYKVLRLLDERTGKECALYLWDEWF
YSTVSPGDSINVIGDFDGEGKCDVDHQNNFLIVHPDTLVAGTKVAASFGCPRRTVLDERL
RSNEHATAALLGTLLHQVFQAGLTQESPSAAGLQEYASIVIKNNIESLYACGVHERGVKA
TLHEAIPKMLNWIHHFRDSKDSTISNVDFGSTNGQRMVKISEVIDIEEMSWAPKYGLKGM
VDASVRVIVGSDMNTANEKLMPLEFKSGKAPNGQASMEHCAQVILYTLLMSERYLKHIDN
GLLYYLQSDQTQGISVQRSDLVGLIIRRNELANDILVASTTQQLPPMLRNPNMCRNCRHL
DACTIYHKADGGNTESSGLADLFDAHVSHLSTLHFKFIRHWNRLIDLEAREMKLPRKDIA
HPHGSKGSDSASHLSSMVLDMKDGFQHHSSHKDSRFIYRFVRQNSSESRESVPIEDTTRT
GTTAADDLDCRLKTGDRVILRTEVSHLTVANGIIAEISRTHVSVSFSKRLRLPWSEPSSE
VANLTNELWRIYKDEFMTSFSIMRFNLMQLFIQSIHTIGIRKMIVDLEPPRFDNGSILSQ
DPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSIL
LASYTNSAVDNLLIKLKAQGIEFLRIGRDEAVHEEVRESCFSAMDMCSVDDIKTKLDQVK
VVASTCLGINSPYLVNRRFDVCIIDEAGQIALPVSIGPLLFASTFVLVGDHYQLPPLVQS
TEARENGMGISLFRRLSEAHPQAISMLQNQYRMCRGIMELSNALIYGDRLCCGSAEVANA
TLVLSTSSSNLPWLRKVLEPTRTVVFINTDMLRAFEARDQNAINNPVEASIIAEIVEELV
NNGVDSKNIGIITPYNSQASLIQHAIPTASVEIHTIDKYQGRDKDCIIVSFVRSREKPRS
SGSSLLGDWHRINVALTRAKKKLIMVGSQRTLSKVPLLMLLLKKVKEQSGILTLSPGDLK
P
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaggaagaagccaaagtcttcagctttgaaaacaaacaaacaatcttcatcc
aatcagtcctcacagccttccggtgttggcatccagcagctgttccaaagacatattcac
aactcccaatcaacttccaactctcttgcctctaaccccgttgtctcaacgcctccaaat
cctccaagcacggtcgatgagaagcctgatgagtccaaagatgtggaccgggaactcact
gaggcgtctcctgaggtctccagaaacgctaagcgcttcaaattctctcctggaatgctg
ataaagcaaagtcaagatgatggtggagaagatattacttggaaaatatctcctatagat
caaagacttcgcgcagctgctaagcaggttcctaagatgatggacttgactgaaaattca
gtggggtttaaatcttctacccttcgcccatgctctctggacaaggtggtgcagaaacaa
tgtcctacatctgatataacttccaaggtggagcagtggttatcttctccctcaaagaaa
gctttcaagagacccgctttgccggcaaatagggtcacggaaagggtgaatccttcccta
gatgcggagtttgagattgttaacacttccagtagtggaaacagtcctttccagacccca
ccttcactttcatgctctcacaacaagcttccttgtactgtaacatgcagtgcagcttgc
ggggtcacgggcactggacaacataaaaaggccttgcttgaacttctagatcaagtggag
gatgtcatctcagttgatgacaaaacagctgacgatgtggggactgtggtgccccaaatt
cgtcttgaagatgataacatctgttccgttggtgtctgcaactccgtagacggagggcca
attgctctactaaaaaaggataattctgtaaatccagatagctatttccttgtattggag
gtatctgagaaacgtggcttggctggctcttctagggtccagtgtccttataaggttctt
cgcttgctagacgagcgcactggaaaagaatgcgctttgtatctctgggatgaatggttt
tacagcactgtatcaccaggagattccatcaatgttattggagactttgacggagagggc
aagtgtgacgtagaccatcaaaataatttcttaattgttcatcctgatacccttgttgct
ggaactaaggttgcagcaagttttggttgtccaaggagaaccgtgctagatgagaggcta
agatccaatgaacacgctacagctgccttgcttggaaccttgctacaccaagtttttcag
gcaggtctcacgcaagagtctccatctgcagctggtttgcaggaatatgcgagcatagtg
attaagaataatattgagagcttatatgcatgtggagtgcatgagcgaggcgtgaaagca
accttacacgaagctatcccaaaaatgttgaattggattcatcatttccgagattcgaag
gactcaacaatatcaaatgttgattttgggtctactaatgggcagcgaatggtaaagata
tcagaggtaattgacattgaggagatgtcatgggcccctaaatatggtctgaaaggaatg
gttgatgcttcagtcagagtgatagttgggtctgacatgaacacagcgaatgagaaacta
atgcctcttgagtttaaatctggaaaggctcctaatgggcaggcatcaatggaacattgt
gcacaggtgatcttgtacacgctccttatgtctgagaggtacctaaagcatattgacaat
ggccttctgtattatctacagtcagatcagacacagggaatttctgttcaaagatcagat
ttggtgggtctgattattcgtcgtaatgaactcgcaaatgacatcctcgtcgcatcaaca
acccaacaactgccaccaatgttacggaatccaaatatgtgccgtaactgtcgccatctg
gacgcctgcacgatttatcataaggcagatggtggaaacacggagagtagcggactcgcc
gatctctttgacgcacatgtatctcatctttcaactttgcattttaaattcatacgacac
tggaacagactgattgacttggaagctagagagatgaagcttcccaggaaagatattgca
catccacatggttcaaagggcagcgactcagctagtcatctttcttctatggttcttgac
atgaaagatgggtttcagcatcatagctctcataaagattctagattcatttatcgtttt
gtacgtcaaaactcatctgaatctagagaaagcgtacccatcgaagatacgactaggact
ggaaccactgcagctgatgacctggattgcagacttaaaacaggagaccgcgtgattctt
cgcacagaagtcagccacctaacagttgcaaatggaattatagcagagattagtcgcact
catgtatcagtttctttttccaagcgtttacgtcttccttggagtgagccttcttctgag
gtggccaatctcactaatgagttatggcgaatttacaaggatgaattcatgacatcattt
tcaattatgaggttcaatctcatgcagcttttcatacaaagcatacataccattggcatc
aggaaaatgattgtggatcttgagcctcctagatttgacaatggatctatactgagccag
gatccagcaatatcatatatttggtcagaaaagagcttaaataatgatcagcgtcaagct
atactaaagatactgactgcgaaggactatgcgttaatcttaggaatgcctggaacaggg
aaaacctccacaatggtccatgctgtgaaagctttgttgatcagaggttcatctattctg
ctggcatcttacacaaactctgcagttgataatctacttatcaaattaaaagcacaggga
attgagtttttacgtattggaagagacgaggctgtacacgaagaagttcgagaaagttgc
ttttcggctatggatatgtgcagtgtcgacgacatcaaaacaaagttggaccaggtcaaa
gttgtggcctctacttgtctgggaatcaatagtccataccttgtgaataggcgatttgac
gtatgcattattgatgaagccggccaaattgccctccctgtatcaataggacctttgctg
tttgcctctacatttgtacttgttggcgaccactatcaactaccgccactagtgcagagt
acagaggctagagagaatgggatggggataagcttgtttcgtaggttatcagaagctcat
cctcaggcaatttcaatgttacaaaaccagtaccgaatgtgtcgaggtattatggaacta
tcaaatgccttgatatatggagacagattgtgctgtggttccgctgaagtagctaatgcc
acacttgttctttctacttccagttctaatttgccatggcttagaaaggttctggagcca
accagaacagttgtatttattaacacagatatgctgcgtgcttttgaagccagggatcag
aatgcgatcaacaatccagttgaagcttcaataatagctgagattgtggaggagctagtt
aacaatggagtggatagtaaaaatattggaatcattactccttataattcacaagcgagc
ctcattcaacacgcaattccaacggcgtctgtggagatacatactattgacaagtatcag
ggaagagataaagactgcataatagtatcctttgtgagatcgcgagagaaaccaaggagc
tctggttcttcactgctcggagattggcataggatcaatgttgctttgacacgagcaaag
aaaaagttgataatggtgggatcacaaagaacactatcaaaagttccactcctgatgctt
ctgctgaagaaggttaaagagcagtcaggtatcttgactctttctccgggggatctaaaa
ccataa
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