Brassica napus (rape): 106377099
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Entry
106377099 CDS
T04128
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106377099
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106377099
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106377099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-CCCH_9
zf-RING_UBOX
IBR_1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
106377099
NCBI-ProteinID:
XP_013672722
LinkDB
All DBs
Position
C8:complement(17345355..17348121)
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AA seq
325 aa
AA seq
DB search
MSKRILCKFFAHGACLKGDNCEFSHDWKDPTNNVCTFYQRGLCSYGSRCRYEHVKLKPHP
SPASSSSALPRSSASEKDLSPLPSSPAWTSDSSDNTFSSSTSKPQDQPICSYAAAGDCPR
GDQCPHIHGDLCPTCGKRCLHPFRPEEREEHKKACEKKHKQLEALKLSQEVECCVCLERV
LSKPTPAERKFGLLTECDHAFCIGCIRNWRSSSPSTGMDVNSTLRACPICRKLSYFVVPS
VIWFSAPEEKKEIMDNYRDKLRSIDCKHFNFGDGNCPFGTSCFYKHAFHDGRLEEVVLRH
LDAEDGQTVIAKDIRLSDFLEGMRI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggatcctttgtaagttctttgctcacggggcttgcttaaaaggtgacaac
tgcgaattctcacatgactggaaggatcctacaaataatgtttgcaccttctaccagaga
ggtctctgctcttacggaagccgatgcaggtacgaacacgtcaaactcaaacctcatcca
tctcctgcttcatcttcctccgctctgcctcgatcatctgcttcagaaaaggatttgagc
ccacttccctcatcaccagcgtggacttcggattcctcagacaacaccttcagctcttct
acatccaaaccacaagaccaacccatctgctcatacgccgcagctggtgactgcccgcgt
ggcgaccaatgcccccacatccacggagacctttgcccaacttgcgggaaacgttgcttg
catcctttcaggcccgaggagagggaggagcacaagaaagcgtgcgagaaaaagcacaag
cagctcgaagcgctgaaacttagccaggaggtggagtgctgcgtctgtttggaacgtgta
ctctctaagccaactccagctgaacgcaagtttgggctgctcactgaatgtgatcatgct
ttctgcataggttgcatcaggaactggcgtagcagttctccttccaccggtatggatgtc
aacagcacgctgagggcttgccccatttgccgcaagttgtcgtattttgtagttcctagt
gtcatctggttctcagctcccgaggagaaaaaagaaatcatggacaactacagggacaaa
ctcaggtcaattgattgtaagcacttcaatttcggagatgggaattgtccgttcggaaca
agttgcttctacaagcatgcgtttcatgatggtcgtttggaggaagtggttctgcggcat
ctggatgcagaagatgggcagactgtgatagcaaaagatataaggttgtctgactttctt
gagggtatgcgtatatga
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