Brassica napus (rape): 106377124
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Entry
106377124 CDS
T04128
Name
(RefSeq) CSC1-like protein At4g15430 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106377124
Transporters [BR:
bna02000
]
Other transporters
Pores ion channels [TC:
1
]
106377124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
106377124
NCBI-ProteinID:
XP_048601838
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All DBs
Position
C1:complement(18592586..18597809)
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AA seq
762 aa
AA seq
DB search
MASINDIGVAAAINIVTAIAFLLAFAILRIQPVNDRVYFPKWYLKGLRSSSIQTGGFGSK
FINLDFRSYVRFLNWMPEALKMPEPELVHHAGLDSVVYLRIYLLGLKIFFPIACVAFTAM
VPVNWTNKGLDRLKHTNISYSDIDKLSLSNIPNGSGSRFWVHLCMAYAITFWTCFMLKRE
YQNIALMRLQFLANDERRPNQFTVLVRNIPTDPHESICELVEHFFKVNHPDHYLTYQAVH
DSTKLSELVQKRKQMQNLLDYNINKHMRTQSKRPIIKMGFLGCCGEQVDGIKYYTSMVES
LTREISEEKQRLRTGTKSIVPAAFVSFKSRWGAAVCAQTEQSRDPTEWLTEWAAEPRDIY
YDNLALPYVDLKIRRIIVAIAYFFLTFFFMIPIAFVQSLANIEGIEKAFPFLKPLIEVKF
FKSIIQGFLPGIALKIFLMFLPRILMQMSKFEGFVSTSSLERRAASRFYMFQFINVFLGS
IVTGTAFQQLNRFLNQSANDIPKTIGVSIPMKATFFITYIMVDGWAGVAGEILRLKPLII
YHLKNSFLVRTENDREEATDAGTIGFNTGEPQIQLYFLLGLVYAAVSPILLPFIILFFAL
AYVVYRHQVINVYNQNYESAGKFWPDVHRRVVTALIVSQLLLTGLLSTKQASKSTPFLLV
LPVLTIGFHMHCKCRYQPAFVRYSLQEAMIKDTLERTREPNLNLKAFFRNAYAHPEFRVG
EDLELEMAVEKPDKTPELVATKRGSWRNTPLPSSKHSCPYSP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaataaacgatattggagtagcagcagcaatcaacatagtcacagcaattgcg
ttcttgctagcttttgcaatactcaggattcaaccagtaaacgacagagtctatttccct
aaatggtatctcaagggcctaagaagtagctctatacaaaccggtggctttggaagcaag
tttatcaacttggactttaggtcatatgttcgattcctcaactggatgcctgaagcactt
aaaatgccagaacctgagcttgtccatcacgcaggactagattctgttgtctacttgagg
atctacttacttgggctaaagatctttttccccatagcttgtgttgcttttacagcaatg
gtccctgttaactggacaaataagggactggatcggttaaaacacactaatataagttac
agtgatatcgataaactttctttatcgaatataccaaatggatcaggcagtagattttgg
gtgcatttgtgtatggcttatgccatcaccttctggacatgctttatgctgaaaagagag
taccagaatatagctttgatgaggctacagtttcttgctaatgacgaaagaagacctaac
cagtttactgttcttgtgagaaacattcctacagaccctcatgaatcaatctgtgaactt
gttgaacatttcttcaaggtcaaccatcctgatcactacctcacttaccaggcagtccac
gactcaacaaaactctcagagttggttcagaagaggaaacaaatgcagaatctgctcgat
tacaatatcaacaaacacatgagaacccaatctaaaaggccaataataaagatggggttt
cttggctgttgcggtgaacaagttgatggaatcaagtactacacgtccatggtggagagt
ctaacgagagaaataagtgaggagaagcagaggttaaggacagggacaaagtctatagtc
cctgcagcttttgtatctttcaagagccgttggggagcagcggtttgtgctcaaactgaa
cagtcaagagacccaacagagtggctaaccgaatgggctgcagagccacgtgacatctac
tatgacaatctggcattgccatacgtcgaccttaagataagaaggatcatagtggcaatc
gcatacttcttcctcaccttcttcttcatgatcccgatagcatttgtacagtcactcgcc
aacatcgaaggcatagagaaggcttttcccttcttgaagccccttatagaagtgaaattt
ttcaagtccatcatccaaggcttccttccagggattgcattgaagatattcctcatgttc
ctcccaagaatattgatgcaaatgtcgaaattcgaaggttttgtcagcacatcttcatta
gaaagaagagcagctagtagattctacatgtttcagttcatcaatgttttcttaggaagc
atagtcaccgggactgcgtttcaacagctcaaccgcttcctcaaccagtctgcaaacgat
attccgaagacaataggcgtctcgattccaatgaaagcgaccttcttcataacatacata
atggtggatggatgggcaggtgttgctggagagatactgaggttgaagccgctaataatc
tatcatctaaagaactctttcctcgtgagaaccgagaatgatagggaagaagcaactgat
gctggaaccataggattcaacactggtgaacctcaaatacaactctacttccttcttggt
cttgtttacgcagcagttagccccatccttcttccttttatcatcctcttcttcgccctg
gcttatgtagtgtaccgtcatcaagttataaatgtgtataaccaaaattatgagagcgca
gggaagttctggcctgacgttcacaggcgtgtcgtgaccgcactgatagtttctcagctg
ctcttgacgggtcttctaagtaccaaacaagcttctaagtcaactccttttcttcttgtg
cttccggtgttgaccattgggttccacatgcactgcaaatgccgttaccaacctgctttt
gtcagatactctttacaggaagccatgatcaaagatacactggaacgcacacgtgagcca
aaccttaacctcaaggctttctttagaaatgcgtatgcccacccggagtttagggtggga
gaagacctagagctagagatggccgtggagaagcctgataagacaccggagctagttgcc
actaagcgtggctcatggaggaacactcctttgcctagcagcaaacatagctgcccttat
tcaccttga
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