Brassica napus (rape): 106377166
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Entry
106377166 CDS
T04128
Name
(RefSeq) exocyst complex component SEC8
KO
K06111
exocyst complex component 4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106377166
Membrane trafficking [BR:
bna04131
]
Exocytosis
Tethering complex
Exocyst complex
106377166
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
z-alpha
Motif
Other DBs
NCBI-GeneID:
106377166
NCBI-ProteinID:
XP_022562732
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Position
A5:25686461..25695211
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AA seq
1055 aa
AA seq
DB search
MGIFDGLPVPSDKTYLREELARIDESWVAARFDSLPHVVHIITSKDRETDILLLREQSDV
VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTDKIGDLKHDLAEAKKSLGTRNKQLHQ
LWYRSVTLRHIIALLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG
ALQDVRSELAKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS
SQPLSRRTRTLKGDSQFGVRGLTNGSHRTASTEEGSSFDGHDEEDSVEHDEATGDGQTIR
NGTDSKLLSYQLPPWLSDSSPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAII
CQRLRPTIHEIIISKIKAHMETKNLSKSACSQGDRTGAAGLHFIKGQSEAYRLSKDKPQN
GTSNSVTHLAVSPVSPLMAPGGKAQAAAKDLLDSILDTIVKIFENHVVVGELLELRASQH
DINTPKSLPTDVNWNADSEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAA
AQTAKLAKKAPKKDKRDASEDGVTFTFRFTDATVSISNQGADLIRQGWGKRAPNSSQEGY
GSAAVLPEQGMYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTM
FVDYRKGVQQAISSAAAFRPRAHTTTYTPTVEKGRPILQGLLAIDLLAKEVLGWAQAMPK
FATDLVKYVQTFLERTFERCRTAYMEAVLEKLSYRLIGRHDIERLMRLDAASACLPSQLG
HSVSHSEAVGSEVELCELFLSLPSIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQA
VPRAASQAEGNSRDQATSPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREY
LEDEDAEEPDDFVISLTSQITRRDEGMAPFISGEKRNYVFGGICGIAASASIKALADMRS
INLFGVQQICRNTIALEQAMAAIPYVDGDSVQQNLDRVRTYYELLNMPFEALLAFIAEHD
QMFTPTEYSNLLKVNVPGRDTPSDAQVRLSEILSH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggggattttcgatggtttgcctgttccctccgataaaacttaccttagggaggagctg
gcacgaatagatgagagctgggttgctgcacgctttgactctttgccacatgtggtccat
atcattacctctaaagaccgtgaaaccgacattcttttactaagggagcaaagtgatgtt
gtcgaggaggttgtggatgaagttgtccatgcttaccatggtggtttcaacaaagccatt
caaaactactctcagatcttgcgactattcagcgagtccactgataaaataggcgacttg
aagcatgatttggcagaagcaaagaagagcttggggacacgcaataaacaattacaccag
ttgtggtaccgttctgtaacattgcggcacatcatcgcgcttttggatcagattgagggc
attgctaaggttccatctcgtattgagaagctcattgctgataagcagttttacgctgct
attcaagtgtatctccagtcttctctgatgcttgagcgtgaggggcttcaaacggttggt
gctcttcaagatgtcagatctgagctagctaagctgcggggagcccttttcttcaaaatt
ctagacgatttgcatgcacatctgtacaatagaggtgaatacagttcagttgcgtcaagc
atatatgaaagagatgatgaagtaccaacaacaacagctgttgcagcaagtcgaatgagc
tcacaaccactctctcgtagaacacggacactgaaaggtgatagtcagtttggtgttaga
ggcctcacaaatggttcacatagaacggcttctactgaggaaggttcatcatttgatgga
catgatgaggaggactctgtagaacatgatgaagccaccggagatggacagactatcagg
aatggcactgatagtaaattgctttcttaccaacttccaccttggctttctgattcctct
cctgacgagtttatcgaagcagtaagaaagagtgatgatccactgcatgtgaagtatcta
cagactcttgttcagtgtctttgcatgctcggcaaagttgcagctgctggtgctattata
tgccaaagacttcgacccacgatacatgagatcataatatccaagattaaggcccatatg
gagactaaaaatttgtcaaagtcagcctgtagtcagggtgatcgaacgggagctgctgga
ttgcattttatcaaaggacagtccgaggcctacagattatcaaaagataaaccgcaaaat
gggacatcaaattctgtaactcacctggctgtgagccctgtctcgcctcttatggctcct
ggaggcaaagcgcaggctgcagcaaaagatcttcttgactcaattttagatactattgtc
aagatatttgaaaatcatgttgttgttggagagcttttggagttgagggcttcgcaacat
gacattaacacaccgaagtcattgcctactgatgtgaattggaacgccgattctgaagca
tcccaagctactggaggctatactatcagttttcctttgacagtcttacagagtgaatgc
caacaactgatatgtgaaattctaagagcaactccagaagctgcgtcagcagatgctgcg
gcacaaactgctaaacttgcaaagaaggctccgaagaaagataaaagggatgcatctgaa
gatggggtaactttcacctttcggttcactgatgcaactgtatcgatttctaatcaggga
gcggatctcattcgtcaaggctggggaaagagggctccaaattcatcacaggaaggttat
ggatctgcagcagttttgcctgaacagggaatgtatctagctgcatctatttaccgacct
gtccttcagtttacagataaaattacttcgatgttgcccaaaaagcattctcagcttgtg
aatgatggattgcttacattcaccgagaactttgtgaaggaccacctgttaccgacaatg
tttgtggactataggaaaggcgtacagcaagctatatcaagtgctgccgcatttaggccc
cgtgcacatacaactacttacaccccaaccgtagaaaagggtcgacctatcttgcaaggt
cttttggcaatagatctccttgcaaaagaggttcttggttgggctcaagccatgcctaaa
tttgctactgaccttgtgaagtatgttcagacatttcttgagagaacatttgagagatgt
cgaacagcatacatggaggctgtgctggagaagctcagttacaggctcattgggaggcat
gatattgagagattgatgcgacttgacgcggcaagtgcatgtttgccatctcagcttggc
cattctgtttctcactctgaagctgttggctccgaagtagaactctgtgaactattctta
agtttgccgtcaattaagcaggataatctaattcgtgatgacaacaaactgattttgtta
gcgtcgcttagtgactcgcttgaatacgtggcagactctattgagaggcttggacaagca
gttcctcgtgcagcaagtcaagctgaaggtaatagcagggatcaagcaacttctccaagg
aatctggcatcatttgctgatgagtacagaaaacttgcgactgattgccttaaggttctt
cgtgttgagatgcaattggaaacagtctttcatcttcaggaaatgacaaatcgggaatac
ctggaggatgaggatgctgaagagccagacgactttgtgatttctcttacttcacagata
acacgtagggacgagggaatggcgcctttcatctctggtgagaagcgcaattatgttttt
ggtggcatttgtggaattgctgcaagtgcgtccattaaggctctggctgacatgagatca
atcaaccttttcggagttcaacaaatttgtaggaacactattgcattggaacaggccatg
gcagctattccatatgtcgatggtgacagtgtacagcagaacctagatcgtgtccgtact
tattatgaactactgaacatgccattcgaggcgctacttgcattcatagcggaacatgac
caaatgtttacacccacagagtattccaaccttctaaaggtgaatgttcctggaagagat
actccttcagatgctcaagtccgcctttccgaaattctttctcactaa
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